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ACD62_252

Alias: ACD62_92243.11306.12

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_252_1

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219..1418
DNA (1200bp) protein (400aa)
tig; FKBP-type peptidylprolyl cis-trans isomerase
Trigger factor n=11 Tax=Clostridium RepID=TIG_CLOB1 (db=UNIREF evalue=4.0e-53 bit_score=212.0 identity=32.63 coverage=98.75)
coiled-coil (db=Coil db_id=coil from=261 to=282 evalue=NA)
seg (db=Seg db_id=seg from=119 to=129)
ACD62_252_2

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1494..2153
DNA (660bp) protein (220aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=3 Tax=Sulfurihydrogenibium RepID=C1DTD6_SULAA (db=UNIREF evalue=2.0e-70 bit_score=268.0 identity=74.75 coverage=90.9090909090909)
seg (db=Seg db_id=seg from=207 to=219)
transmembrane_regions (db=TMHMM db_id=tmhmm from=94 to=116)
ACD62_252_3

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2164..3417
DNA (1254bp) protein (418aa)
ATP-dependent protease
ATP-dependent protease
ATP-dependent Clp protease, ATP-binding subunit ClpX n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=A9GIS5_SORC5 (db=UNIREF evalue=1.0e-166 bit_score=589.0 identity=72.79 coverage=97.1291866028708)
seg (db=Seg db_id=seg from=388 to=400)
ACD62_252_4

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comp(3610..3828)
DNA (219bp) protein (73aa)
3610..3828 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD50016.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_252_5

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4044..4394
DNA (351bp) protein (117aa)
4044..4394 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD50017.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_252_6

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4398..4898
DNA (501bp) protein (167aa)
Methylated-DNA--protein-cysteine methyltransferase
MGMT (db=PatternScan db_id=PS00374 from=119 to=125 evalue=0.0 interpro_id=IPR001497 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO=Molecular Function: methylated-DNA-[protein]-cysteine S-methyltransferase activity (GO:0003908), Biological Process: DNA repair (GO:0006281))
ogt: methylated-DNA-[protein]-cysteine S-met (db=HMMTigr db_id=TIGR00589 from=69 to=148 evalue=5.4e-49 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE (db=HMMPanther db_id=PTHR10815 from=35 to=149 evalue=9.8e-42 interpro_id=IPR014048 interpro_description=Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
ACD62_252_7

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comp(4849..5778)
DNA (930bp) protein (310aa)
seg (db=Seg db_id=seg from=24 to=40)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=23 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD50019.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Thrombospondin type 3 repeat-containing protein
ACD62_252_8

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6250..8820
DNA (2571bp) protein (857aa)
putative glucomannan 4-beta-mannosyltransferase
putative glucomannan 4-beta-mannosyltransferase
Glycosyl transferase, group 2 family protein n=1 Tax=Rhodospirillum centenum SW RepID=B6IR89_RHOCS (db=UNIREF evalue=0.0 bit_score=723.0 identity=42.63 coverage=97.0828471411902)
transmembrane_regions (db=TMHMM db_id=tmhmm from=799 to=816)
ACD62_252_9

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comp(8882..9223)
DNA (342bp) protein (114aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=88)
seg (db=Seg db_id=seg from=72 to=84)
Uncharacterized protein {ECO:0000313|EMBL:EKD50021.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD62_252_10
Leptospira biflexa, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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comp(9168..10091)
DNA (924bp) protein (308aa)
hypothetical protein
seg (db=Seg db_id=seg from=274 to=283)
seg (db=Seg db_id=seg from=92 to=107)
Formin homology 2 domain (FH2 domain) (db=superfamily db_id=SSF101447 from=97 to=197 evalue=2.8e-07 interpro_id=IPR015425 interpro_description=Actin-binding FH2)
ACD62_252_11

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comp(10088..10546)
DNA (459bp) protein (153aa)
capC; capsule biosynthesis protein
seg (db=Seg db_id=seg from=131 to=146)
seg (db=Seg db_id=seg from=2 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=124 to=146)
ACD62_252_12

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comp(10586..11344)
DNA (759bp) protein (253aa)
NAD-dependent epimerase/dehydratase
seg (db=Seg db_id=seg from=216 to=234)
CAPSULEPROTB (db=FPrintScan db_id=PR01758 from=117 to=134 evalue=1.5e-10 interpro_id=IPR008337 interpro_description=Capsule biosynthesis protein CapB GO=Cellular Component: membrane (GO:0016020), Biological Process: capsule polysaccharide biosynthetic process (GO:0045227))
CAPSULEPROTB (db=FPrintScan db_id=PR01758 from=222 to=238 evalue=1.5e-10 interpro_id=IPR008337 interpro_description=Capsule biosynthesis protein CapB GO=Cellular Component: membrane (GO:0016020), Biological Process: capsule polysaccharide biosynthetic process (GO:0045227))
Poly-g-glutamate (PGA) biosynthesis operon. Salt tolerance, C storage. Only bacteria that make it are G+, according to Candela and Fouet review (2006) Jill Banfield (11/15/12)
Displaying 12 items

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