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ACD62_289

Alias: ACDUNK_2757.68427.17

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD62_289_1
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104..1183)
DNA (1080bp) protein (360aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase (EC:2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.22]; K01809 mannose-6-phosphate isomerase [EC:5.3.1.8] (db=KEGG evalue=7.0e-91 bit_score=337.0 identity=45.35 coverage=97.5)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=5 to=344 evalue=3.3e-111)
MANNOSE-1-PHOSPHATE GUANYLYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF1 from=5 to=344 evalue=3.3e-111)
NTP_transferase (db=HMMPfam db_id=PF00483 from=6 to=286 evalue=3.1e-60 interpro_id=IPR005835 interpro_description=Nucleotidyl transferase GO=Biological Process: biosynthetic process (GO:0009058), Molecular Function: nucleotidyltransferase activity (GO:0016779))
ACD62_289_2
RLO_Deltaproteobacteria_40_28, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1200..2345)
DNA (1146bp) protein (382aa)
soluble ligand binding domain-containing protein
seg (db=Seg db_id=seg from=95 to=106)
transmembrane_regions (db=TMHMM db_id=tmhmm from=358 to=375)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ACD62_289_3
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2431..3465)
DNA (1035bp) protein (345aa)
Putative uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GNV5_9DELT (db=UNIREF evalue=3.0e-84 bit_score=315.0 identity=49.42 coverage=97.6811594202899)
hypothetical protein
seg (db=Seg db_id=seg from=58 to=68)
hypothetical protein Tax=GWA2_Deltaproteobacteria_45_12_curated
ACD62_289_4
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

Not on your lists

comp(3742..5628)
DNA (1887bp) protein (629aa)
polysaccharide biosynthesis protein CapD
polysaccharide biosynthesis protein CapD
Polysaccharide biosynthesis protein CapD n=2 Tax=Anaeromyxobacter RepID=B4UJN3_ANASK (db=UNIREF evalue=1.0e-124 bit_score=451.0 identity=42.2 coverage=85.5325914149444)
transmembrane_regions (db=TMHMM db_id=tmhmm from=51 to=73)
ACD62_289_5
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5719..6846)
DNA (1128bp) protein (376aa)
hypothetical protein
seg (db=Seg db_id=seg from=34 to=49)
seg (db=Seg db_id=seg from=80 to=96)
transmembrane_regions (db=TMHMM db_id=tmhmm from=69 to=91)
ACD62_289_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6892..8094)
DNA (1203bp) protein (401aa)
DegT/DnrJ/EryC1/StrS family aminotransferase
DegT/DnrJ/EryC1/StrS family aminotransferase
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Comamonas testosteroni KF-1 RepID=B7WT66_COMTE (db=UNIREF evalue=3.0e-139 bit_score=498.0 identity=66.07 coverage=96.7581047381546)
seg (db=Seg db_id=seg from=271 to=290)
ACD62_289_7
Caldatribacterium saccharofermentans, Caldatribacterium, Atribacteria, Bacteria

Not on your lists

comp(8091..8723)
DNA (633bp) protein (211aa)
transferase
Transferase hexapeptide repeat containing protein n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z5I2_9BACT (db=UNIREF evalue=5.0e-52 bit_score=207.0 identity=52.28 coverage=92.8909952606635)
NeuD_NnaD: sugar O-acyltransferase, sialic (db=HMMTigr db_id=TIGR03570 from=6 to=203 evalue=3.9e-83 interpro_id=IPR020019 interpro_description=Sialic acid O-acyltransferase, NeuD)
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=6 to=206 evalue=6.1e-43 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
ACD62_289_8
Thermoanaerobacter siderophilus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8710..9342)
DNA (633bp) protein (211aa)
undecaprenyl-phosphate galactose phosphotransferase (EC:2.7.8.6)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Bac_transf (db=HMMPfam db_id=PF02397 from=8 to=186 evalue=3.6e-64 interpro_id=IPR003362 interpro_description=Bacterial sugar transferase)
Glycosyl transferase possibly involved in lipopolysaccharide synthesis {ECO:0000313|EMBL:EIW00673.1}; Flags: Precursor;; TaxID=880478 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
UDP-glucose lipid carrier transferase; GO_process: GO:0009242 - colanic acid aka M-antigen biosyn Jill Banfield (11/15/12)
ACD62_289_9
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9453..10694)
DNA (1242bp) protein (414aa)
group 1 glycosyl transferase
seg (db=Seg db_id=seg from=92 to=103)
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=7 to=411 evalue=6.2e-32)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=23 to=411 evalue=4.7e-23)
ACD62_289_10
RBG_13_Planctomycetes_44_8b_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(10703..11530)
DNA (828bp) protein (276aa)
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=42 to=268 evalue=2.0e-13 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
Uncharacterized protein Tax=RBG_13_Planctomycetes_44_8b_curated
Uncharacterized protein n=1 Tax=Mogibacterium sp. CM50 RepID=J5WMI2_9FIRM
ACD62_289_11
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

Not on your lists

comp(11527..12648)
DNA (1122bp) protein (374aa)
WbpH n=1 Tax=Dictyoglomus thermophilum H-6-12 RepID=B5YCR2_DICT6 (db=UNIREF evalue=1.0e-94 bit_score=350.0 identity=44.86 coverage=98.3957219251337)
WbpH
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=3 to=365 evalue=3.0e-37)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=60 to=367 evalue=1.3e-23)
ACD62_289_12
RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12692..14044)
DNA (1353bp) protein (451aa)
WblL protein
WblL protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SJ04_9RHOB (db=UNIREF evalue=1.0e-36 bit_score=157.0 identity=30.25 coverage=86.4745011086474)
transmembrane_regions (db=TMHMM db_id=tmhmm from=420 to=437)
transmembrane_regions (db=TMHMM db_id=tmhmm from=398 to=415)
ACD62_289_13
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14169..15632)
DNA (1464bp) protein (488aa)
Lipopolysaccharide biosynthesis protein WzxC
seg (db=Seg db_id=seg from=26 to=38)
transmembrane_regions (db=TMHMM db_id=tmhmm from=448 to=470)
transmembrane_regions (db=TMHMM db_id=tmhmm from=416 to=438)
ACD62_289_14
unknown

Not on your lists

comp(15666..15812)
DNA (147bp) protein (49aa)

This feature has no annotations

ACD62_289_15
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15813..17006)
DNA (1194bp) protein (398aa)
ATP-grasp protein-like protein
ATP-grasp enzyme-like n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LGV2_SYNFM (db=UNIREF evalue=3.0e-33 bit_score=146.0 identity=29.61 coverage=91.7085427135678)
seg (db=Seg db_id=seg from=141 to=155)
Glutathione synthetase ATP-binding domain-like (db=superfamily db_id=SSF56059 from=106 to=322 evalue=1.8e-22)
ACD62_289_16
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17003..18151)
DNA (1149bp) protein (383aa)
hypothetical protein
hypothetical protein
Phosphonopyruvate decarboxylase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAD1_9BACE (db=UNIREF evalue=9.0e-87 bit_score=324.0 identity=48.91 coverage=95.0391644908616)
seg (db=Seg db_id=seg from=165 to=179)
ACD62_289_17
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18163..19515)
DNA (1353bp) protein (451aa)
MmgE/PrpD family protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVF0_9DELT (db=UNIREF evalue=1.0e-132 bit_score=476.0 identity=50.56 coverage=98.8913525498891)
MmgE/PrpD family protein rbh
MmgE/PrpD family protein rbh
2-methylcitrate dehydratase PrpD (db=superfamily db_id=SSF103378 from=1 to=449 evalue=3.1e-94 interpro_id=IPR005656 interpro_description=MmgE/PrpD GO=Biological Process: propionate catabolic process (GO:0019543), Molecular Function: 2-methylcitrate dehydratase activity (GO:0047547))
ACD62_289_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19527..20483)
DNA (957bp) protein (319aa)
Aflatoxin B1 aldehyde reductase 2 n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TAD0_9BACE (db=UNIREF evalue=1.0e-102 bit_score=376.0 identity=54.95 coverage=97.4921630094044)
yhdN; General stress protein 69 (EC:1.1.1.-) rbh
ALDO/KETO REDUCTASE (db=HMMPanther db_id=PTHR11732:SF9 from=1 to=273 evalue=3.2e-79)
ALDO/KETO REDUCTASE (db=HMMPanther db_id=PTHR11732 from=1 to=273 evalue=3.2e-79 interpro_id=IPR001395 interpro_description=Aldo/keto reductase GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
Xenobiotics Biodegradation and Metabolism; Metabolism of xenobiotics by cytochrome P450 Jill Banfield (11/15/12)
ACD62_289_19
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20499..21389)
DNA (891bp) protein (297aa)
Conserved hypothetical peptidase n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RMM1_FIBSS (db=UNIREF evalue=5.0e-130 bit_score=467.0 identity=73.56 coverage=98.989898989899)
hypothetical protein
hypothetical protein
Conserved hypothetical peptidase {ECO:0000313|EMBL:EFI32847.1}; TaxID=555779 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" sour
ACD62_289_20
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21430..22299)
DNA (870bp) protein (290aa)
Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=1 Tax=Fibrobacter succinogenes subsp. succinogenes S85 RepID=C9RML3_FIBSS (db=UNIREF evalue=2.0e-74 bit_score=282.0 identity=47.18 coverage=96.551724137931)
Fumerase (db=HMMPfam db_id=PF05681 from=10 to=286 evalue=6.3e-51 interpro_id=IPR004646 interpro_description=Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO=Molecular Function: lyase activity (GO:0016829))
ttdA_fumA_fumB: hydrolyase, tartrate a (db=HMMTigr db_id=TIGR00722 from=8 to=287 evalue=3.8e-25 interpro_id=IPR004646 interpro_description=Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO=Molecular Function: lyase activity (GO:0016829))
ACD62_289_21
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22321..22851)
DNA (531bp) protein (177aa)
Fe-S type hydro-lyase tartrate/fumarate beta region
Fumerase_C (db=HMMPfam db_id=PF05683 from=13 to=174 evalue=5.2e-21 interpro_id=IPR004647 interpro_description=Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO=Molecular Function: hydro-lyase activity (GO:0016836))
FumA C-terminal domain-like (db=superfamily db_id=SSF117457 from=8 to=174 evalue=4.6e-20)
no description (db=Gene3D db_id=G3DSA:3.20.130.10 from=10 to=175 evalue=1.6e-13 interpro_id=IPR004647 interpro_description=Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO=Molecular Function: hydro-lyase activity (GO:0016836))
ACD62_289_22
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22894..24036)
DNA (1143bp) protein (381aa)
Putative ATP/GTP-binding protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=C0GVE9_9DELT (db=UNIREF evalue=4.0e-149 bit_score=531.0 identity=65.44 coverage=99.2125984251969)
hypothetical protein
hypothetical protein
Citrate lyase, beta subunit (db=HMMPIR db_id=PIRSF015582 from=7 to=369 evalue=1.2e-35 interpro_id=IPR011206 interpro_description=Citrate lyase, beta subunit GO=Molecular Function: citrate (pro-3S)-lyase activity (GO:0008815), Cellular Component: citrate lyase complex (GO:0009346))
ACD62_289_23
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24125..25201)
DNA (1077bp) protein (359aa)
UDP-phosphate alpha-N-acetylglucosaminephosphotransferase (EC:2.7.8.-)
Undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LWM7_SYNAS (db=UNIREF evalue=5.0e-71 bit_score=271.0 identity=44.44 coverage=85.7938718662953)
transmembrane_regions (db=TMHMM db_id=tmhmm from=253 to=275)
transmembrane_regions (db=TMHMM db_id=tmhmm from=296 to=318)
Biocyc: a transporter? Jill Banfield (11/15/12)
ACD62_289_24
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

Not on your lists

comp(25195..26154)
DNA (960bp) protein (320aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=3 to=314 evalue=4.1e-68)
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=6 to=316 evalue=1.0e-55)
no description (db=Gene3D db_id=G3DSA:3.40.50.720 from=2 to=259 evalue=3.5e-41 interpro_id=IPR016040 interpro_description=NAD(P)-binding domain GO=Molecular Function: catalytic activity (GO:0003824), Molecular Function: binding (GO:0005488), Biological Process: metabolic process (GO:0008152))
ACD62_289_25
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26151..27404)
DNA (1254bp) protein (418aa)
hypothetical protein
hypothetical protein
Glycosyltransferase n=2 Tax=Magnetospirillum RepID=Q2WB26_MAGSA (db=UNIREF evalue=4.0e-123 bit_score=445.0 identity=55.07 coverage=98.5645933014354)
seg (db=Seg db_id=seg from=115 to=126)
ACD62_289_26
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(27401..28525)
DNA (1125bp) protein (375aa)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ART5_PELPD (db=UNIREF evalue=3.0e-115 bit_score=419.0 identity=56.35 coverage=95.4666666666667)
UDP-N-acetylglucosamine 2-epimerase
UDP-N-acetylglucosamine 2-epimerase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=367 evalue=2.5e-109)
ACD62_289_27
unknown

Not on your lists

comp(28522..29925)
DNA (1404bp) protein (468aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=378 to=400)
transmembrane_regions (db=TMHMM db_id=tmhmm from=407 to=426)
transmembrane_regions (db=TMHMM db_id=tmhmm from=431 to=450)
seg (db=Seg db_id=seg from=410 to=416)
ACD62_289_28
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29900..31030)
DNA (1131bp) protein (377aa)
rffA; lipopolysaccharide biosynthesis protein, TDP-4-oxo-6-deoxy-D-glucose transaminase
rffA; lipopolysaccharide biosynthesis protein, TDP-4-oxo-6-deoxy-D-glucose transaminase
TDP-4-keto-6-deoxy-D-glucose transaminase n=1 Tax=Geobacter sp. M18 RepID=C6MWC9_9DELT (db=UNIREF evalue=3.0e-137 bit_score=491.0 identity=62.73 coverage=98.1432360742706)
ECA_wecE: TDP-4-keto-6-deoxy-D-glucose trans (db=HMMTigr db_id=TIGR02379 from=3 to=376 evalue=1.2e-222 interpro_id=IPR012749 interpro_description=TDP-4-keto-6-deoxy-D-glucose transaminase)
ACD62_289_29
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

comp(31008..31805)
DNA (798bp) protein (266aa)
Generic methyltransferase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2YCC6_NITMU (db=UNIREF evalue=1.0e-72 bit_score=276.0 identity=52.21 coverage=92.1052631578947)
generic methyltransferase
transmembrane_regions (db=TMHMM db_id=tmhmm from=180 to=202)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=6 to=198 evalue=5.2e-27)
ACD62_289_30
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(31824..32621)
DNA (798bp) protein (266aa)
hypothetical protein
seg (db=Seg db_id=seg from=32 to=41)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=214 evalue=5.9e-32)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=11 to=195 evalue=5.7e-19)
Displaying items 1-30 of 61 in total

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