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ACD15_40

Alias: ACD15_2912.11501.15

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_40_1

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815..1306
DNA (492bp) protein (164aa)
hypothetical protein
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=159 evalue=2.9e-32 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=1 to=140 evalue=1.6e-21 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=64 to=140 evalue=1.1e-11 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
ACD15_40_2

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1308..1478
DNA (171bp) protein (57aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
Uncharacterized protein {ECO:0000313|EMBL:EKE11307.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_40_3

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comp(1420..1725)
DNA (306bp) protein (102aa)
excinuclease ABC C subunit domain protein; K07461 putative endonuclease (db=KEGG evalue=1.0e-09 bit_score=65.5 identity=45.0 coverage=76.4705882352941)
GIY-YIG (db=HMMPfam db_id=PF01541 from=2 to=71 evalue=2.3e-12 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=1 to=73 evalue=3.1e-10 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
Uncharacterized protein {ECO:0000313|EMBL:EKE11308.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_40_4

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comp(1747..3399)
DNA (1653bp) protein (551aa)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau n=1 Tax=Thermincola sp. JR RepID=D5X8W4_9FIRM (db=UNIREF evalue=8.0e-103 bit_score=378.0 identity=38.8 coverage=89.8366606170599)
dnaX_nterm: DNA polymerase III, subunit ga (db=HMMTigr db_id=TIGR02397 from=2 to=360 evalue=1.3e-185 interpro_id=IPR012763 interpro_description=DNA polymerase III, subunit gamma/ tau GO=Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Molecular Function: ATP binding (GO:0005524), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD15_40_5

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comp(3504..4163)
DNA (660bp) protein (220aa)
Putative uncharacterized protein n=1 Tax=Bacteroides capillosus ATCC 29799 RepID=A6NSW3_9BACE (db=UNIREF evalue=1.0e-07 bit_score=60.1 identity=32.65 coverage=64.0909090909091)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=193 to=215)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=64)
ACD15_40_6

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comp(4169..4918)
DNA (750bp) protein (250aa)
50S ribosomal protein L7/L12 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B21A2 (db=UNIREF evalue=3.0e-42 bit_score=175.0 identity=50.62 coverage=63.6)
coiled-coil (db=Coil db_id=coil from=5 to=26 evalue=NA)
seg (db=Seg db_id=seg from=179 to=191)
50S ribosomal protein L7/L12 {ECO:0000313|EMBL:EKE11311.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_40_7

Not on your lists

5340..5774
DNA (435bp) protein (145aa)
MraZ protein
AbrB/MazE/MraZ-like (db=superfamily db_id=SSF89447 from=1 to=137 evalue=2.8e-44)
TIGR00242: protein MraZ (db=HMMTigr db_id=TIGR00242 from=1 to=143 evalue=8.6e-39 interpro_id=IPR003444 interpro_description=MraZ)
MRAZ_THETN_Q8R9F8; (db=BlastProDom db_id=PD006745 from=1 to=138 evalue=3.0e-37 interpro_id=IPR003444 interpro_description=MraZ)
ACD15_40_8

Not on your lists

5903..6829
DNA (927bp) protein (309aa)
mraW; S-adenosyl-methyltransferase MraW
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AT90_9BACE (db=UNIREF evalue=5.0e-79 bit_score=298.0 identity=55.23 coverage=98.705501618123)
seg (db=Seg db_id=seg from=36 to=49)
seg (db=Seg db_id=seg from=275 to=286)
ACD15_40_9

Not on your lists

6928..7335
DNA (408bp) protein (136aa)
coiled-coil (db=Coil db_id=coil from=71 to=106 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
Uncharacterized protein {ECO:0000313|EMBL:EKE11314.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_40_10

Not on your lists

7352..9244
DNA (1893bp) protein (631aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CCK5_THET1 (db=UNIREF evalue=3.0e-103 bit_score=379.0 identity=39.12 coverage=87.797147385103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
ACD15_40_11

Not on your lists

9231..10559
DNA (1329bp) protein (443aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
seg (db=Seg db_id=seg from=308 to=323)
UDP-N-ACETYLMURAMOYLALANYL-D-GLUTAMYL-2,6-DIAMINOPIMELATE--D-ALANYL-D- ALANYL LIGASE (db=HMMPanther db_id=PTHR23135:SF3 from=34 to=422 evalue=2.6e-79 interpro_id=IPR005863 interpro_description=UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: regulation of cell shape (GO:0008360), Molecular Function: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activ
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=34 to=422 evalue=2.6e-79)
ACD15_40_12

Not on your lists

10726..11175
DNA (450bp) protein (150aa)
NUDIX hydrolase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9AY63_HERA2 (db=UNIREF evalue=2.0e-24 bit_score=114.0 identity=44.03 coverage=88.0)
NUDIX hydrolase
NUDIX_BOX (db=PatternScan db_id=PS00893 from=36 to=57 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=5 to=126 evalue=6.9e-35 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
Displaying 12 items

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