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ACD64_62

Alias: ACD64_245501.6840.6

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD64_62_1

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comp(2..694)
DNA (693bp) protein (231aa)
alsT_1; Na+/alanine symporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
transmembrane_regions (db=TMHMM db_id=tmhmm from=139 to=161)
ACD64_62_2

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837..1238
DNA (402bp) protein (134aa)
yrrK; RNase H-like ribonuclease
UPF0081 (db=HMMPfam db_id=PF03652 from=1 to=129 evalue=1.1e-30 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=131 evalue=6.0e-26 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
no description (db=Gene3D db_id=G3DSA:3.30.420.140 from=2 to=128 evalue=3.4e-22 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
ACD64_62_3

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1625..2287
DNA (663bp) protein (221aa)
Glycoprotease family protein
bact_YeaZ: universal bacterial protein YeaZ (db=HMMTigr db_id=TIGR03725 from=3 to=214 evalue=7.1e-20 interpro_id=IPR022496 interpro_description=Conserved hypothetical protein CHP03725, YeaZ)
Actin-like ATPase domain (db=superfamily db_id=SSF53067 from=1 to=104 evalue=1.5e-17)
Peptidase_M22 (db=HMMPfam db_id=PF00814 from=33 to=101 evalue=4.3e-14 interpro_id=IPR000905 interpro_description=Peptidase M22, glycoprotease GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
ACD64_62_4

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comp(2284..3138)
DNA (855bp) protein (285aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=28)
seg (db=Seg db_id=seg from=98 to=109)
Ankyrin repeat (db=superfamily db_id=SSF48403 from=123 to=282 evalue=1.8e-08 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
no description (db=Gene3D db_id=G3DSA:1.25.40.20 from=129 to=283 evalue=1.6e-05 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
ACD64_62_5

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comp(3255..4004)
DNA (750bp) protein (250aa)
hypothetical protein
Putative RNA methyltransferase with a deep trefoil knot n=1 Tax=Pseudoalteromonas tunicata D2 RepID=A4C941_9GAMM (db=UNIREF evalue=7.0e-14 bit_score=81.3 identity=30.21 coverage=91.6)
seg (db=Seg db_id=seg from=162 to=173)
Methyltrans_RNA (db=HMMPfam db_id=PF04452 from=36 to=243 evalue=7.5e-40 interpro_id=IPR006700 interpro_description=Ribosomal RNA small subunit methyltransferase E GO=Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
ACD64_62_6

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comp(4007..4306)
DNA (300bp) protein (100aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=82)
Uncharacterized protein {ECO:0000313|EMBL:EKD48825.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD64_62_7

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comp(4367..4990)
DNA (624bp) protein (208aa)
seg (db=Seg db_id=seg from=177 to=189)
seg (db=Seg db_id=seg from=38 to=55)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=18 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD48826.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD64_62_8

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5081..6601
DNA (1521bp) protein (507aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=2 Tax=Legionella longbeachae RepID=D3HL03_LEGLN (db=UNIREF evalue=3.0e-123 bit_score=446.0 identity=45.24 coverage=97.2386587771203)
gpmI; phosphoglycerate mutases (EC:5.4.2.1)
gpmI; phosphoglycerate mutases (EC:5.4.2.1)
pgm_bpd_ind: 2,3-bisphosphoglycerate-inde (db=HMMTigr db_id=TIGR01307 from=7 to=505 evalue=1.1e-205 interpro_id=IPR005995 interpro_description=Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO=Molecular Function: phosphoglycerate mutase activity (GO:0004619), Biological Process: glucose catabolic process (GO:0006007))
ACD64_62_9

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comp(6711..6872)
DNA (162bp) protein (54aa)
Ankyrin repeat (db=superfamily db_id=SSF48403 from=1 to=40 evalue=6.8e-06 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
ANK_REP_REGION (db=ProfileScan db_id=PS50297 from=1 to=38 evalue=9.224 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
Uncharacterized protein {ECO:0000313|EMBL:EKD48828.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 9 items

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