ggKbase home page

ACD66_107

Alias: ACD66_198273.5883.7

Search features with annotation key words

Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD66_107_1
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

352..561
DNA (210bp) protein (70aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
SecG (db=HMMPfam db_id=PF03840 from=2 to=66 evalue=1.7e-12 interpro_id=IPR004692 interpro_description=Preprotein translocase SecG subunit GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
secG: preprotein translocase, SecG subunit (db=HMMTigr db_id=TIGR00810 from=1 to=69 evalue=1.2e-08 interpro_id=IPR004692 interpro_description=Preprotein translocase SecG subunit GO=Biological Process: protein secretion (GO:0009306), Molecular Function: P-P-bond-hydrolysis-driven protein transmembrane transporter activity (GO:0015450), Cellular Component: integral to membrane (GO:0016021))
ACD66_107_2
GWB1_OD1_41_7, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

864..2453
DNA (1590bp) protein (530aa)
putative ABC transporter substrate binding protein
Periplasmic binding protein-like II (db=superfamily db_id=SSF53850 from=18 to=522 evalue=1.0e-102)
SBP_bac_5 (db=HMMPfam db_id=PF00496 from=62 to=433 evalue=2.6e-70 interpro_id=IPR000914 interpro_description=Bacterial extracellular solute-binding protein, family 5 GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810))
no description (db=Gene3D db_id=G3DSA:3.10.105.10 from=266 to=485 evalue=1.2e-37)
ACD66_107_3
GWF2_OD1_41_430, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

2693..4558
DNA (1866bp) protein (622aa)
hypothetical protein
hypothetical protein
RNA-metabolising metallo-beta-lactamase family protein n=9 Tax=Clostridium perfringens RepID=Q0TPH9_CLOP1 (db=UNIREF evalue=6.0e-138 bit_score=494.0 identity=41.19 coverage=88.1028938906752)
seg (db=Seg db_id=seg from=40 to=58)
ACD66_107_4
GWC2_OD1_40_450, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

4833..5708
DNA (876bp) protein (292aa)
TrpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
seg (db=Seg db_id=seg from=156 to=167)
trpS: tryptophan--tRNA ligase (db=HMMTigr db_id=TIGR00233 from=1 to=289 evalue=1.6e-86 interpro_id=IPR002306 interpro_description=Tryptophanyl-tRNA synthetase, class Ib GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tryptophan-tRNA ligase activity (GO:0004830), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tryptophanyl-tRNA aminoacylation (GO:0006436))
TRYPTOPHANYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR10055 from=1 to=288 evalue=1.0e-78 interpro_id=IPR002306 interpro_description=Tryptophanyl-tRNA synthetase, class Ib GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: tryptophan-tRNA ligase activity (GO:0004830), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: tryptophanyl-tRNA aminoacylation (GO:0006436))
Displaying 4 items

View Taxonomy