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ACD69_128

Alias: ACD69_6618.3201.38

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD69_128_1

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comp(1..96)
DNA (96bp) protein (32aa)
1..96 - (rbs_motif=3Base/5BMM rbs_spacer=13-15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD45444.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD69_128_2

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1178..1738
DNA (561bp) protein (187aa)
16S rRNA methyltransferase B
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VFH6_PSEU5 (db=UNIREF evalue=2.0e-56 bit_score=221.0 identity=57.53 coverage=98.9304812834225)
NOL1_NOP2_SUN (db=PatternScan db_id=PS01153 from=68 to=79 evalue=0.0 interpro_id=IPR018314 interpro_description=Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: methyltransferase activity (GO:0008168))
Nol1_Nop2_Fmu (db=HMMPfam db_id=PF01189 from=2 to=182 evalue=2.5e-54 interpro_id=IPR001678 interpro_description=Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p)
ACD69_128_3

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1927..2346
DNA (420bp) protein (140aa)
Putative Holliday junction resolvase n=1 Tax=Haemophilus ducreyi RepID=RUVX_HAEDU (db=UNIREF evalue=1.0e-30 bit_score=135.0 identity=47.69 coverage=92.1428571428571)
Holliday junction resolvase-like protein
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=3 to=139 evalue=2.0e-33 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
RNAse_H_YqgF: RNAse H-fold protein YqgF (db=HMMTigr db_id=TIGR00250 from=8 to=137 evalue=2.9e-33 interpro_id=IPR005227 interpro_description=Resolvase, holliday junction-type, YqgF-like GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: DNA repair (GO:0006281), Biological Process: DNA recombination (GO:0006310), Biological Process: response to DNA damage stimulus (GO:0006974), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788))
ACD69_128_4

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2568..3221
DNA (654bp) protein (218aa)
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1)
RIBUL_P_3_EPIMER_1 (db=PatternScan db_id=PS01085 from=29 to=43 evalue=0.0 interpro_id=IPR000056 interpro_description=Ribulose-phosphate 3-epimerase GO=Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750), Biological Process: carbohydrate metabolic process (GO:0005975))
RIBUL_P_3_EPIMER_2 (db=PatternScan db_id=PS01086 from=132 to=154 evalue=0.0 interpro_id=IPR000056 interpro_description=Ribulose-phosphate 3-epimerase GO=Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750), Biological Process: carbohydrate metabolic process (GO:0005975))
rpe: ribulose-phosphate 3-epimerase (db=HMMTigr db_id=TIGR01163 from=1 to=212 evalue=3.7e-133 interpro_id=IPR000056 interpro_description=Ribulose-phosphate 3-epimerase GO=Molecular Function: ribulose-phosphate 3-epimerase activity (GO:0004750), Biological Process: carbohydrate metabolic process (GO:0005975))
Displaying 4 items

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