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ACD6_31

Alias: ACD6_20970.16909.13

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_31_1
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..158)
DNA (156bp) protein (52aa)
[2FE-2S] ferredoxin
ADX (db=PatternScan db_id=PS00814 from=42 to=52 evalue=0.0 interpro_id=IPR018298 interpro_description=Adrenodoxin, iron-sulphur binding site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537))
2Fe-2S ferredoxin-like (db=superfamily db_id=SSF54292 from=2 to=52 evalue=4.1e-10 interpro_id=IPR001041 interpro_description=Ferredoxin GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
no description (db=Gene3D db_id=G3DSA:3.10.20.30 from=1 to=52 evalue=1.5e-09 interpro_id=IPR012675 interpro_description=Beta-grasp fold, ferredoxin-type)
ACD6_31_2

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comp(174..2033)
DNA (1860bp) protein (620aa)
Chaperone protein hscA homolog n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVH0_ACILW (db=UNIREF evalue=0.0 bit_score=1211.0 identity=99.68 coverage=99.6774193548387)
hscA; chaperone protein HscA
hscA; chaperone protein HscA
coiled-coil (db=Coil db_id=coil from=518 to=546 evalue=NA)
ACD6_31_3

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comp(2075..2590)
DNA (516bp) protein (172aa)
Fe-S protein assembly co-chaperone HscB n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVG9_ACILW (db=UNIREF evalue=8.0e-82 bit_score=305.0 identity=99.36 coverage=90.1162790697674)
DnaJ-domain-containing proteins 1
seg (db=Seg db_id=seg from=157 to=171)
hscB: Fe-S protein assembly co-chaperone Hsc (db=HMMTigr db_id=TIGR00714 from=13 to=160 evalue=9.2e-22 interpro_id=IPR004640 interpro_description=Co-chaperone Hsc20 GO=Biological Process: protein folding (GO:0006457), Molecular Function: chaperone binding (GO:0051087))
ACD6_31_4
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2694..3014)
DNA (321bp) protein (107aa)
hypothetical protein
HESB (db=PatternScan db_id=PS01152 from=87 to=104 evalue=0.0 interpro_id=IPR017870 interpro_description=FeS cluster insertion, C-terminal, conserved site)
IscA (db=HMMTigr db_id=TIGR02011 from=2 to=106 evalue=1.0e-57 interpro_id=IPR011302 interpro_description=ISC system FeS cluster assembly, IscA scaffold GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: protein binding (GO:0005515), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
HesB_yadR_yfhF (db=HMMTigr db_id=TIGR00049 from=2 to=106 evalue=9.60004130884281e-48 interpro_id=IPR016092 interpro_description=FeS cluster insertion GO=Molecular Function: structural molecule activity (GO:0005198), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD6_31_5

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comp(3049..3435)
DNA (387bp) protein (129aa)
Iron-binding protein n=19 Tax=Acinetobacter RepID=A3M564_ACIBT (db=UNIREF evalue=4.0e-67 bit_score=256.0 identity=96.09 coverage=98.4496124031008)
NifU-like protein involved in Fe-S cluster formation
iscU (db=HMMTigr db_id=TIGR01999 from=3 to=126 evalue=1.69998802370953e-74 interpro_id=IPR011339 interpro_description=ISC system FeS cluster assembly, IscU scaffold GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: protein binding (GO:0005515), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
NIF_FeS_clus_asmbl_NifU_N (db=HMMPanther db_id=PTHR10093 from=1 to=124 evalue=1.19999063421924e-70 interpro_id=IPR002871 interpro_description=NIF system FeS cluster assembly, NifU, N-terminal GO=Molecular Function: iron ion binding (GO:0005506), Biological Process: iron-sulfur cluster assembly (GO:0016226), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD6_31_6
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3540..4757)
DNA (1218bp) protein (406aa)
Cysteine desulfurase n=18 Tax=Acinetobacter RepID=ISCS_ACIB3 (db=UNIREF evalue=0.0 bit_score=799.0 identity=93.33 coverage=99.5073891625616)
cysteine desulfurase
cysteine desulfurase
NifS (db=HMMPIR db_id=PIRSF005572 from=1 to=385 evalue=0.0 interpro_id=IPR016454 interpro_description=Cysteine desulfurase, NifS)
ACD6_31_7
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4759..5232)
DNA (474bp) protein (158aa)
rrf2 family protein (transcriptional regulator) family protein
HTH_RRF2_2 (db=ProfileScan db_id=PS51197 from=2 to=131 evalue=0.0 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
HTH_RRF2_1 (db=PatternScan db_id=PS01332 from=49 to=67 evalue=0.0 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
rrf2_super (db=HMMTigr db_id=TIGR00738 from=1 to=131 evalue=2.30000440726534e-56 interpro_id=IPR000944 interpro_description=Transcription regulator Rrf2)
ACD6_31_8

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comp(5345..5995)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVG4_ACILW (db=UNIREF evalue=5.0e-117 bit_score=423.0 identity=95.83 coverage=99.0783410138249)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=163 to=198 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=30)
ACD6_31_9

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6199..6672
DNA (474bp) protein (158aa)
poly(hydroxyalcanoate) granule associated protein
coiled-coil (db=Coil db_id=coil from=124 to=152 evalue=NA)
coiled-coil (db=Coil db_id=coil from=87 to=108 evalue=NA)
seg (db=Seg db_id=seg from=144 to=157)
ACD6_31_10
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6835..7107
DNA (273bp) protein (91aa)
hupB; DNA-binding protein HU-beta
HISTONE_LIKE (db=PatternScan db_id=PS00045 from=46 to=65 evalue=0.0 interpro_id=IPR020816 interpro_description=Histone-like DNA-binding protein, conserved site GO=Molecular Function: DNA binding (GO:0003677))
BHL (db=HMMSmart db_id=SM00411 from=1 to=90 evalue=2.19999900980707e-49 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
Bac_DNA_binding (db=HMMPfam db_id=PF00216 from=1 to=89 evalue=2.1e-33 interpro_id=IPR000119 interpro_description=Histone-like bacterial DNA-binding protein GO=Molecular Function: DNA binding (GO:0003677))
ACD6_31_11
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7278..7457
DNA (180bp) protein (60aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=6 to=28)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1217667 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellac
ppiD; peptidyl-prolyl cis-trans isomerase precursor (PPIase) (EC:5.2.1.8)
ACD6_31_12

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7471..9207
DNA (1737bp) protein (579aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVG1_ACILW (db=UNIREF evalue=0.0 bit_score=1089.0 identity=98.1 coverage=99.6545768566494)
ppiD; peptidyl-prolyl cis-trans isomerase precursor (PPIase) (EC:5.2.1.8)
ppiD; peptidyl-prolyl cis-trans isomerase precursor (PPIase) (EC:5.2.1.8)
seg (db=Seg db_id=seg from=453 to=465)
ACD6_31_13

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comp(9316..10185)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVG0_ACILW (db=UNIREF evalue=4.0e-158 bit_score=560.0 identity=97.58 coverage=99.3103448275862)
hypothetical protein
hypothetical protein
coiled-coil (db=Coil db_id=coil from=209 to=230 evalue=NA)
ACD6_31_14

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10220..10690
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVF9_ACILW (db=UNIREF evalue=2.0e-85 bit_score=317.0 identity=98.72 coverage=98.7261146496815)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE24200.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=4 Tax=Acinetobacter RepID=I4ZSC8_9GAMM
ACD6_31_15

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10796..11467
DNA (672bp) protein (224aa)
hypothetical protein
seg (db=Seg db_id=seg from=93 to=104)
seg (db=Seg db_id=seg from=19 to=30)
seg (db=Seg db_id=seg from=43 to=67)
ACD6_31_16
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11533..12147)
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVF7_ACILW (db=UNIREF evalue=2.0e-104 bit_score=380.0 identity=100.0 coverage=99.0243902439024)
hypothetical protein
DUF1449 (db=HMMPfam db_id=PF07290 from=11 to=192 evalue=3.1e-07 interpro_id=IPR010840 interpro_description=Protein of unknown function DUF1449)
Uncharacterized protein {ECO:0000313|EMBL:ENW25119.1}; TaxID=1217667 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter lwof
ACD6_31_17
Acinetobacter sp. MII, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12167..12490)
DNA (324bp) protein (108aa)
hypothetical protein
ISP domain (db=superfamily db_id=SSF50022 from=2 to=105 evalue=3.8e-22 interpro_id=IPR017941 interpro_description=Rieske [2Fe-2S] iron-sulphur domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537), Biological Process: oxidation reduction (GO:0055114))
Rieske (db=HMMPfam db_id=PF00355 from=3 to=96 evalue=1.4e-14 interpro_id=IPR017941 interpro_description=Rieske [2Fe-2S] iron-sulphur domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537), Biological Process: oxidation reduction (GO:0055114))
no description (db=Gene3D db_id=G3DSA:2.102.10.10 from=1 to=86 evalue=9.5e-10 interpro_id=IPR017941 interpro_description=Rieske [2Fe-2S] iron-sulphur domain GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537), Biological Process: oxidation reduction (GO:0055114))
ACD6_31_18

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comp(12490..13494)
DNA (1005bp) protein (335aa)
Fructokinase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVF5_ACILW (db=UNIREF evalue=1.0e-161 bit_score=572.0 identity=94.01 coverage=99.4029850746269)
putative sugar kinase protein
putative sugar kinase protein
seg (db=Seg db_id=seg from=271 to=285)
ACD6_31_19
Acinetobacter sp. CIP A162, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13771..14223
DNA (453bp) protein (151aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVF4_ACILW (db=UNIREF evalue=2.0e-81 bit_score=303.0 identity=97.33 coverage=98.6754966887417)
GNAT family acetyltransferase
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=1 to=146 evalue=8.1e-21 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=56 to=133 evalue=3.0e-12 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
ACD6_31_20

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14389..16947
DNA (2559bp) protein (853aa)
Zn-dependent peptidase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SVF3_ACILW (db=UNIREF evalue=0.0 bit_score=1714.0 identity=99.65 coverage=99.8827667057444)
peptidase M16
peptidase M16
coiled-coil (db=Coil db_id=coil from=474 to=495 evalue=NA)
Displaying 20 items

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