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ACD6_59

Alias: ACD6_29908.12818.12

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_59_1

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comp(3..206)
DNA (204bp) protein (68aa)
NAD(P)H:quinone oxidoreductase, type IV n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYN4_ACILW (db=UNIREF evalue=4.0e-31 bit_score=136.0 identity=98.51 coverage=97.0588235294118)
NAD(P)H:quinone oxidoreductase, type IV
FLAVODOXIN (db=PatternScan db_id=PS00201 from=8 to=24 evalue=0.0 interpro_id=IPR001226 interpro_description=Flavodoxin, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: FMN binding (GO:0010181))
Flavoproteins (db=superfamily db_id=SSF52218 from=3 to=68 evalue=9.6e-11)
ACD6_59_2
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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317..1564
DNA (1248bp) protein (416aa)
tRNA-processing ribonuclease BN(RNase BN) n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYN5_ACILW (db=UNIREF evalue=0.0 bit_score=841.0 identity=99.76 coverage=99.5192307692308)
hypothetical protein
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=145 to=167)
ACD6_59_3
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1594..1815)
DNA (222bp) protein (74aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYN6_ACILW (db=UNIREF evalue=3.0e-31 bit_score=137.0 identity=94.44 coverage=95.9459459459459)
Permeases of the drug/metabolite transporter (DMT) superfamily
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=53 to=72)
ACD6_59_4

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comp(2514..3452)
DNA (939bp) protein (313aa)
DMT family permease n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYN7_ACILW (db=UNIREF evalue=3.0e-150 bit_score=534.0 identity=97.31 coverage=94.5686900958466)
membrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
transmembrane_regions (db=TMHMM db_id=tmhmm from=158 to=180)
ACD6_59_5

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3557..4378
DNA (822bp) protein (274aa)
Bacterial regulatory helix-turn-helix protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYN8_ACILW (db=UNIREF evalue=1.0e-142 bit_score=509.0 identity=96.34 coverage=99.2700729927007)
AraC family transcriptional regulator
AraC family transcriptional regulator
seg (db=Seg db_id=seg from=142 to=157)
ACD6_59_6

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comp(4431..5072)
DNA (642bp) protein (214aa)
4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYN9_ACILW (db=UNIREF evalue=1.0e-108 bit_score=395.0 identity=97.18 coverage=99.0654205607477)
2-keto-4-pentenoate hydratase
seg (db=Seg db_id=seg from=88 to=101)
FUMARYLACETOACETATE HYDROLASE (db=HMMPanther db_id=PTHR11820 from=4 to=213 evalue=1.8e-68)
ACD6_59_7

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comp(5104..5601)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYP0_ACILW (db=UNIREF evalue=8.0e-91 bit_score=335.0 identity=98.18 coverage=98.7951807228916)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=54)
ACD6_59_8

Not on your lists

5760..7058
DNA (1299bp) protein (433aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYP1_ACILW (db=UNIREF evalue=0.0 bit_score=874.0 identity=98.84 coverage=99.5381062355658)
hypothetical protein
hypothetical protein
Bet v1-like (db=superfamily db_id=SSF55961 from=77 to=234 evalue=1.9e-06)
ACD6_59_9

Not on your lists

comp(7308..7412)
DNA (105bp) protein (35aa)
7308..7412 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE23810.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_59_10
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7610..10057
DNA (2448bp) protein (816aa)
Ribonuclease R n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYP3_ACILW (db=UNIREF evalue=0.0 bit_score=1532.0 identity=99.74 coverage=93.8725490196078)
Exoribonuclease R
Exoribonuclease R
seg (db=Seg db_id=seg from=106 to=117)
ACD6_59_11
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12167..12643
DNA (477bp) protein (159aa)
Zn-dependent oligopeptidase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SYP6_ACILW (db=UNIREF evalue=2.0e-79 bit_score=297.0 identity=96.84 coverage=98.7421383647799)
Zn-dependent oligopeptidase
seg (db=Seg db_id=seg from=77 to=85)
PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED (db=HMMPanther db_id=PTHR11804 from=1 to=154 evalue=1.4e-69)
ACD6_59_12
Acinetobacter sp. NIPH 713, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12675..12854
DNA (180bp) protein (60aa)
hypothetical protein
DUF2387 (db=HMMPfam db_id=PF09526 from=4 to=52 evalue=2.9e-21 interpro_id=IPR012658 interpro_description=Conserved hypothetical protein CHP02443)
TIGR02443: conserved hypothetical protein (db=HMMTigr db_id=TIGR02443 from=3 to=58 evalue=5.6e-11 interpro_id=IPR012658 interpro_description=Conserved hypothetical protein CHP02443)
Uncharacterized protein n=16 Tax=Bacteria RepID=N8Q9I4_9GAMM
Displaying 12 items

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