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ACD6_98

Alias: ACD6_29098.24873.12

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_98_1
Acinetobacter sp. CIP 64.7, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..348
DNA (348bp) protein (116aa)
P-protein
PDT (db=HMMPfam db_id=PF00800 from=3 to=99 evalue=7.9e-32 interpro_id=IPR001086 interpro_description=Prephenate dehydratase GO=Molecular Function: prephenate dehydratase activity (GO:0004664), Biological Process: L-phenylalanine biosynthetic process (GO:0009094))
PREPHENATE DEHYDRATASE (P PROTEIN) (db=HMMPanther db_id=PTHR21022 from=7 to=99 evalue=5.1e-30)
PREPHENATE_DEHYDR_3 (db=ProfileScan db_id=PS51171 from=1 to=115 evalue=31.07 interpro_id=IPR001086 interpro_description=Prephenate dehydratase GO=Molecular Function: prephenate dehydratase activity (GO:0004664), Biological Process: L-phenylalanine biosynthetic process (GO:0009094))
ACD6_98_2
Acinetobacter sp. CIP 102136, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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330..785
DNA (456bp) protein (152aa)
pheA; bifuctional chorismate mutase P/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
seg (db=Seg db_id=seg from=22 to=33)
PREPHENATE_DEHYDR_1 (db=PatternScan db_id=PS00857 from=34 to=56 evalue=0.0 interpro_id=IPR018528 interpro_description=Prephenate dehydratase, conserved site GO=Molecular Function: prephenate dehydratase activity (GO:0004664), Biological Process: L-phenylalanine biosynthetic process (GO:0009094))
PREPHENATE DEHYDRATASE (P PROTEIN) (db=HMMPanther db_id=PTHR21022 from=2 to=151 evalue=1.2e-42)
ACD6_98_3
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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852..1943
DNA (1092bp) protein (364aa)
Histidinol-phosphate aminotransferase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STJ6_ACILW (db=UNIREF evalue=0.0 bit_score=688.0 identity=99.72 coverage=99.4505494505495)
hisC_2; histidinol-phosphate aminotransferase
hisC_2; histidinol-phosphate aminotransferase
seg (db=Seg db_id=seg from=49 to=61)
ACD6_98_4

Not on your lists

1947..4193
DNA (2247bp) protein (749aa)
3-phosphoshikimate 1-carboxyvinyltransferase n=16 Tax=Acinetobacter RepID=B7GZU8_ACIB3 (db=UNIREF evalue=0.0 bit_score=1397.0 identity=90.64 coverage=99.7329773030708)
bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
bifunctional cyclohexadienyl dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
EPSP_SYNTHASE_2 (db=PatternScan db_id=PS00885 from=647 to=665 evalue=0.0 interpro_id=IPR001986 interpro_description=3-phosphoshikimate 1-carboxyvinyltransferase, core GO=Molecular Function: transferase activity, transferring alkyl or aryl (other than methyl) groups (GO:0016765))
ACD6_98_5

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4323..4685
DNA (363bp) protein (121aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKE23887.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=3 Tax=Acinetobacter RepID=N8VFD9_9GAMM
ACD6_98_6

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4673..5215
DNA (543bp) protein (181aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STJ3_ACILW (db=UNIREF evalue=2.0e-102 bit_score=373.0 identity=97.78 coverage=98.8950276243094)
N-acetyltransferase GCN5
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=9 to=175 evalue=6.0e-33 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=10 to=178 evalue=5.2e-25 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
ACD6_98_7
Acinetobacter sp. CIP 64.7, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5212..5916)
DNA (705bp) protein (235aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STJ2_ACILW (db=UNIREF evalue=4.0e-118 bit_score=427.0 identity=100.0 coverage=88.0851063829787)
hydrolase
hydrolase
seg (db=Seg db_id=seg from=209 to=223)
ACD6_98_8

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6040..6822
DNA (783bp) protein (261aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STJ1_ACILW (db=UNIREF evalue=3.0e-147 bit_score=524.0 identity=96.92 coverage=99.2337164750958)
hypothetical protein
hypothetical protein
DUF328 (db=HMMPfam db_id=PF03883 from=1 to=245 evalue=8.1e-94 interpro_id=IPR005583 interpro_description=Protein of unknown function DUF328)
ACD6_98_9

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6828..7010
DNA (183bp) protein (61aa)
6828..7010 + (rbs_motif=GGA/GAG/AGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE23868.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_98_10
Acinetobacter sp. CIP 102136, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8038..9360
DNA (1323bp) protein (441aa)
Inner membrane protein yicO
Inner membrane protein yicO
Xanthine/uracil permease n=4 Tax=Acinetobacter RepID=D0SC36_ACIJO (db=UNIREF evalue=0.0 bit_score=730.0 identity=92.5 coverage=99.546485260771)
transmembrane_regions (db=TMHMM db_id=tmhmm from=238 to=260)
ACD6_98_11

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9437..10438
DNA (1002bp) protein (334aa)
Adenosine deaminase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STI9_ACILW (db=UNIREF evalue=0.0 bit_score=688.0 identity=99.4 coverage=99.4011976047904)
add; adenosine deaminase (EC:3.5.4.4)
add; adenosine deaminase (EC:3.5.4.4)
aden_deam: adenosine deaminase (db=HMMTigr db_id=TIGR01430 from=10 to=329 evalue=7.7e-170 interpro_id=IPR006330 interpro_description=Adenosine deaminase GO=Molecular Function: adenosine deaminase activity (GO:0004000), Biological Process: purine ribonucleoside monophosphate biosynthetic process (GO:0009168))
ACD6_98_12

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10485..10838
DNA (354bp) protein (118aa)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=6.0)
Uncharacterized protein {ECO:0000313|EMBL:EKE23871.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N9GVP7_ACILW
ACD6_98_13

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comp(10882..11445)
DNA (564bp) protein (188aa)
Cytochrome B561 n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STI7_ACILW (db=UNIREF evalue=2.0e-103 bit_score=377.0 identity=98.93 coverage=98.936170212766)
putative cytochrome
putative cytochrome
transmembrane_regions (db=TMHMM db_id=tmhmm from=146 to=168)
ACD6_98_14
Acinetobacter sp. CIP 64.7, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11663..12034
DNA (372bp) protein (124aa)
hypothetical protein
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=18 evalue=0.0)
Uncharacterized protein {ECO:0000313|EMBL:ENX31607.1}; TaxID=1144673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N9FLM5_ACILW
ACD6_98_15

Not on your lists

12094..12681
DNA (588bp) protein (196aa)
Ribonuclease HII n=2 Tax=Acinetobacter RepID=D0STI5_ACILW (db=UNIREF evalue=8.0e-95 bit_score=349.0 identity=99.49 coverage=98.9795918367347)
rnhB; ribonuclease HII (EC:3.1.26.4)
seg (db=Seg db_id=seg from=54 to=71)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=187 evalue=3.2e-67 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD6_98_16
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12777..13031)
DNA (255bp) protein (85aa)
Carbon storage regulator homolog n=15 Tax=Acinetobacter RepID=CSRA_ACIB3 (db=UNIREF evalue=2.0e-38 bit_score=160.0 identity=92.86 coverage=97.6470588235294)
Carbon storage regulator (could also regulate swarming and quorum sensing)
CsrA (db=BlastProDom db_id=PD009007 from=1 to=48 evalue=0.0 interpro_id=IPR003751 interpro_description=Carbon storage regulator GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of carbohydrate metabolic process (GO:0006109), Biological Process: mRNA catabolic process (GO:0006402))
csrA (db=HMMTigr db_id=TIGR00202 from=1 to=64 evalue=1.50000306971104e-29 interpro_id=IPR003751 interpro_description=Carbon storage regulator GO=Molecular Function: RNA binding (GO:0003723), Biological Process: regulation of carbohydrate metabolic process (GO:0006109), Biological Process: mRNA catabolic process (GO:0006402))
ACD6_98_17
Acinetobacter sp. CIP A162, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13282..14562)
DNA (1281bp) protein (427aa)
Aspartokinase n=18 Tax=Acinetobacter RepID=A3M3S8_ACIBT (db=UNIREF evalue=0.0 bit_score=768.0 identity=90.61 coverage=99.5316159250585)
lysC; aspartate kinase (EC:2.7.2.4)
lysC; aspartate kinase (EC:2.7.2.4)
asp_kin_monofn (db=HMMTigr db_id=TIGR00656 from=1 to=416 evalue=0.0 interpro_id=IPR005260 interpro_description=Aspartate kinase, monofunctional class GO=Molecular Function: aspartate kinase activity (GO:0004072), Biological Process: biosynthetic process (GO:0009058))
ACD6_98_18

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comp(14627..17305)
DNA (2679bp) protein (893aa)
Alanyl-tRNA synthetase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STI2_ACILW (db=UNIREF evalue=0.0 bit_score=1770.0 identity=99.44 coverage=99.7760358342665)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
coiled-coil (db=Coil db_id=coil from=373 to=401 evalue=NA)
ACD6_98_19

Not on your lists

17709..18731
DNA (1023bp) protein (341aa)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STI1_ACILW (db=UNIREF evalue=0.0 bit_score=663.0 identity=98.53 coverage=99.4134897360704)
glyceraldehyde-3-phosphate dehydrogenase, type I
glyceraldehyde-3-phosphate dehydrogenase, type I
seg (db=Seg db_id=seg from=198 to=210)
ACD6_98_20

Not on your lists

18924..19220
DNA (297bp) protein (99aa)
coiled-coil (db=Coil db_id=coil from=41 to=62 evalue=NA)
coiled-coil (db=Coil db_id=coil from=69 to=90 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
Uncharacterized protein {ECO:0000313|EMBL:EKE23879.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_98_21

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comp(19265..19564)
DNA (300bp) protein (100aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STH9_ACILW (db=UNIREF evalue=1.0e-32 bit_score=142.0 identity=93.94 coverage=98.0)
branched-chain amino acid transport family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=6 to=28)
seg (db=Seg db_id=seg from=63 to=81)
ACD6_98_22

Not on your lists

comp(19561..20310)
DNA (750bp) protein (250aa)
Azaleucine resistance protein AzlC n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STH8_ACILW (db=UNIREF evalue=2.0e-136 bit_score=488.0 identity=97.97 coverage=98.0)
azlC family protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=209 to=231)
transmembrane_regions (db=TMHMM db_id=tmhmm from=182 to=196)
ACD6_98_23

Not on your lists

20458..20913
DNA (456bp) protein (152aa)
Transcription regulator protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STH7_ACILW (db=UNIREF evalue=6.0e-82 bit_score=305.0 identity=98.68 coverage=98.6842105263158)
lrp; Leucine-responsive regulatory protein
no description (db=HMMSmart db_id=SM00344 from=1 to=110 evalue=2.5e-43 interpro_id=IPR019888 interpro_description=Transcription regulator AsnC-type GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sequence-specific DNA binding (GO:0043565))
Dimeric alpha+beta barrel (db=superfamily db_id=SSF54909 from=64 to=149 evalue=8.4e-22 interpro_id=IPR011008 interpro_description=Dimeric alpha-beta barrel)
ACD6_98_24
Acinetobacter sp. MII, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21120..22286
DNA (1167bp) protein (389aa)
ATP phosphoribosyltransferase, regulatory subunit n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STH6_ACILW (db=UNIREF evalue=0.0 bit_score=771.0 identity=100.0 coverage=99.4858611825193)
ATP phosphoribosyltransferase regulatory subunit
ATP phosphoribosyltransferase regulatory subunit
hisS_second (db=HMMTigr db_id=TIGR00443 from=14 to=328 evalue=1.69998802370953e-101 interpro_id=IPR004517 interpro_description=Histidyl-tRNA synthetase, class IIa, putative GO=Biological Process: histidine biosynthetic process (GO:0000105), Cellular Component: cytoplasm (GO:0005737))
ACD6_98_25
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22357..23676
DNA (1320bp) protein (440aa)
Adenylosuccinate synthetase n=4 Tax=Acinetobacter RepID=C6RNW2_ACIRA (db=UNIREF evalue=0.0 bit_score=841.0 identity=97.72 coverage=99.5454545454545)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
seg (db=Seg db_id=seg from=241 to=257)
ACD6_98_26

Not on your lists

23837..24145
DNA (309bp) protein (103aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
transmembrane_regions (db=TMHMM db_id=tmhmm from=37 to=59)
transmembrane_regions (db=TMHMM db_id=tmhmm from=80 to=98)
ACD6_98_27
Acinetobacter sp. CIP 51.11, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24258..24911
DNA (654bp) protein (218aa)
Peptidase M48 family protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STH3_ACILW (db=UNIREF evalue=2.0e-104 bit_score=381.0 identity=99.54 coverage=99.5412844036697)
Peptidase family M48 family protein
Peptidase family M48 family protein
seg (db=Seg db_id=seg from=156 to=181)
Displaying 27 items

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