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ACD6_113

Alias: ACD6_9378.24626.12

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_113_1

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1..594
DNA (594bp) protein (198aa)
Na+/H+ antiporter family n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ72_ACILW (db=UNIREF evalue=2.0e-96 bit_score=354.0 identity=95.94 coverage=98.989898989899)
Na+/H+ antiporter family
transmembrane_regions (db=TMHMM db_id=tmhmm from=168 to=190)
transmembrane_regions (db=TMHMM db_id=tmhmm from=134 to=156)
ACD6_113_2

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comp(644..1681)
DNA (1038bp) protein (346aa)
AraC-type DNA-binding domain-containing protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ71_ACILW (db=UNIREF evalue=0.0 bit_score=639.0 identity=96.81 coverage=99.4219653179191)
AraC-type DNA-binding domain-containing protein
seg (db=Seg db_id=seg from=52 to=67)
no description (db=HMMSmart db_id=SM00342 from=256 to=337 evalue=8.1e-17 interpro_id=IPR018060 interpro_description=Helix-turn-helix, AraC domain)
ACD6_113_3

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1824..2702
DNA (879bp) protein (293aa)
Metal-dependent hydrolase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ70_ACILW (db=UNIREF evalue=5.0e-162 bit_score=573.0 identity=99.66 coverage=99.3174061433447)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=126 to=141)
ACD6_113_4

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comp(2764..3756)
DNA (993bp) protein (331aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ69_ACILW (db=UNIREF evalue=0.0 bit_score=686.0 identity=99.09 coverage=99.3957703927493)
hypothetical protein
hypothetical protein
DUF2804 (db=HMMPfam db_id=PF10974 from=8 to=329 evalue=5.2e-90 interpro_id=IPR021243 interpro_description=Protein of unknown function DUF2804)
ACD6_113_5

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comp(3894..4403)
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ68_ACILW (db=UNIREF evalue=7.0e-95 bit_score=348.0 identity=98.22 coverage=98.8235294117647)
hypothetical protein
DUF1543 (db=HMMPfam db_id=PF07566 from=16 to=59 evalue=5.2e-19 interpro_id=IPR011440 interpro_description=Protein of unknown function DUF1543)
Uncharacterized protein {ECO:0000313|EMBL:EKE22456.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_113_6

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4888..7119
DNA (2232bp) protein (744aa)
Isocitrate dehydrogenase [NADP] n=19 Tax=Acinetobacter RepID=A3M7K1_ACIBT (db=UNIREF evalue=0.0 bit_score=1399.0 identity=91.79 coverage=99.7311827956989)
isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase (EC:1.1.1.42)
seg (db=Seg db_id=seg from=576 to=589)
ACD6_113_7

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8428..9462
DNA (1035bp) protein (345aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ66_ACILW (db=UNIREF evalue=0.0 bit_score=671.0 identity=98.55 coverage=99.4202898550725)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
seg (db=Seg db_id=seg from=44 to=59)
ACD6_113_8

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9479..10507
DNA (1029bp) protein (343aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ65_ACILW (db=UNIREF evalue=0.0 bit_score=654.0 identity=97.95 coverage=99.4169096209913)
hypothetical protein
seg (db=Seg db_id=seg from=61 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
ACD6_113_9

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10557..11126
DNA (570bp) protein (190aa)
LemA family protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ64_ACILW (db=UNIREF evalue=2.0e-90 bit_score=334.0 identity=94.71 coverage=98.9473684210526)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=2 to=24)
seg (db=Seg db_id=seg from=4 to=20)
ACD6_113_10

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11240..11959
DNA (720bp) protein (240aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ63_ACILW (db=UNIREF evalue=2.0e-109 bit_score=398.0 identity=90.3 coverage=97.5)
seg (db=Seg db_id=seg from=33 to=44)
Uncharacterized protein {ECO:0000313|EMBL:EKE22449.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Predicted protein n=8 Tax=Acinetobacter RepID=D0SZ63_ACILW
ACD6_113_11

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12212..13342
DNA (1131bp) protein (377aa)
Queuine tRNA-ribosyltransferase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ62_ACILW (db=UNIREF evalue=0.0 bit_score=780.0 identity=99.73 coverage=99.4694960212202)
Queuine/archaeosine tRNA-ribosyltransferase
Queuine/archaeosine tRNA-ribosyltransferase
Q_tRNA_tgt: queuine tRNA-ribosyltransfera (db=HMMTigr db_id=TIGR00430 from=3 to=371 evalue=3.6e-232 interpro_id=IPR004803 interpro_description=Queuine tRNA-ribosyltransferase GO=Biological Process: tRNA processing (GO:0008033), Molecular Function: queuine tRNA-ribosyltransferase activity (GO:0008479), Biological Process: queuosine biosynthetic process (GO:0008616))
ACD6_113_12
Acinetobacter sp. CIP 51.11, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13443..13772
DNA (330bp) protein (110aa)
IISP family preprotein translocase
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
yajC: preprotein translocase, YajC subunit (db=HMMTigr db_id=TIGR00739 from=19 to=102 evalue=1.7e-29 interpro_id=IPR003849 interpro_description=YajC)
YajC (db=HMMPfam db_id=PF02699 from=20 to=101 evalue=3.2e-29 interpro_id=IPR003849 interpro_description=YajC)
ACD6_113_13
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13908..15761
DNA (1854bp) protein (618aa)
secD; preprotein translocase subunit SecD
secD; preprotein translocase subunit SecD
Preprotein translocase, IISP family, part of the channel n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6FEJ6_ACIAD (db=UNIREF evalue=0.0 bit_score=1092.0 identity=89.81 coverage=99.6763754045307)
seg (db=Seg db_id=seg from=419 to=433)
ACD6_113_14

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15773..16744
DNA (972bp) protein (324aa)
Protein-export membrane protein SecF n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ59_ACILW (db=UNIREF evalue=4.0e-164 bit_score=580.0 identity=99.07 coverage=99.3827160493827)
secF; preprotein translocase subunit SecF
secF; preprotein translocase subunit SecF
transmembrane_regions (db=TMHMM db_id=tmhmm from=277 to=299)
ACD6_113_15

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comp(16769..17452)
DNA (684bp) protein (228aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ58_ACILW (db=UNIREF evalue=5.0e-103 bit_score=376.0 identity=92.07 coverage=99.1228070175439)
seg (db=Seg db_id=seg from=163 to=173)
seg (db=Seg db_id=seg from=88 to=105)
coiled-coil (db=Coil db_id=coil from=45 to=66 evalue=NA)
ACD6_113_16

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comp(17553..19862)
DNA (2310bp) protein (770aa)
GTP pyrophosphokinase n=4 Tax=Acinetobacter RepID=D0SZ57_ACILW (db=UNIREF evalue=0.0 bit_score=1580.0 identity=99.48 coverage=99.7402597402597)
relA; GTP pyrophosphokinase
relA; GTP pyrophosphokinase
coiled-coil (db=Coil db_id=coil from=133 to=154 evalue=NA)
ACD6_113_17

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comp(19895..21283)
DNA (1389bp) protein (463aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ56_ACILW (db=UNIREF evalue=0.0 bit_score=904.0 identity=97.4 coverage=99.5680345572354)
rumA; 23S rRNA 5-methyluridine methyltransferase (EC:2.1.1.-)
rumA; 23S rRNA 5-methyluridine methyltransferase (EC:2.1.1.-)
seg (db=Seg db_id=seg from=69 to=83)
ACD6_113_18
Acinetobacter sp. CIP 51.11, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21280..22104)
DNA (825bp) protein (275aa)
3'-5' exonuclease n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ55_ACILW (db=UNIREF evalue=1.0e-126 bit_score=455.0 identity=99.54 coverage=78.9090909090909)
hypothetical protein
hypothetical protein
Exon_PolB (db=HMMPfam db_id=PF10108 from=46 to=217 evalue=7.1e-62 interpro_id=IPR019288 interpro_description=Predicted 3'-5' exonuclease, PolB-like)
ACD6_113_19
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22123..23052)
DNA (930bp) protein (310aa)
Cysteine synthase n=1 Tax=Acinetobacter haemolyticus ATCC 19194 RepID=D4XMN5_ACIHA (db=UNIREF evalue=2.0e-167 bit_score=592.0 identity=91.91 coverage=99.3548387096774)
cysM; cysteine synthase B
cysM; cysteine synthase B
cysM (db=HMMTigr db_id=TIGR01138 from=15 to=303 evalue=0.0 interpro_id=IPR005858 interpro_description=Cysteine synthase B GO=Molecular Function: cysteine synthase activity (GO:0004124), Biological Process: cysteine biosynthetic process from serine (GO:0006535))
ACD6_113_20
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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23415..24662
DNA (1248bp) protein (416aa)
Sensor protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SZ53_ACILW (db=UNIREF evalue=0.0 bit_score=806.0 identity=99.76 coverage=99.7596153846154)
barA; GacS-like sensor kinase protein
barA; GacS-like sensor kinase protein
seg (db=Seg db_id=seg from=172 to=191)
Displaying 20 items

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