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ACD6_116

Alias: ACD6_54617.20941.12

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_116_1

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1..204
DNA (204bp) protein (68aa)
DNA primase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWX0_ACILW (db=UNIREF evalue=6.0e-23 bit_score=109.0 identity=98.51 coverage=97.0588235294118)
seg (db=Seg db_id=seg from=32 to=43)
DNA primase {ECO:0000313|EMBL:EKE23150.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_116_2

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comp(313..627)
DNA (315bp) protein (105aa)
Glutamyl-tRNA reductase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWX1_ACILW (db=UNIREF evalue=3.0e-43 bit_score=177.0 identity=82.52 coverage=97.1428571428571)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
GlutR_dimer (db=HMMPfam db_id=PF00745 from=2 to=90 evalue=5.1e-18 interpro_id=IPR015896 interpro_description=Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal GO=Molecular Function: glutamyl-tRNA reductase activity (GO:0008883), Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: NADP or NADPH binding (GO:0050661), Biological Process: oxidation reduction (GO:0055114))
Glutamyl tRNA-reductase dimerization domain (db=superfamily db_id=SSF69075 from=1 to=94 evalue=1.2e-16 interpro_id=IPR015896 interpro_description=Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal GO=Molecular Function: glutamyl-tRNA reductase activity (GO:0008883), Biological Process: tetrapyrrole biosynthetic process (GO:0033014), Molecular Function: NADP or NADPH binding (GO:0050661), Biological Process: oxidation reduction (GO:0055114))
ACD6_116_3

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1652..3418
DNA (1767bp) protein (589aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWX2_ACILW (db=UNIREF evalue=0.0 bit_score=1113.0 identity=99.3 coverage=96.6044142614601)
signal peptide
signal peptide
seg (db=Seg db_id=seg from=553 to=567)
ACD6_116_4

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3426..4004
DNA (579bp) protein (193aa)
Outer membrane lipoprotein LolB n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWX3_ACILW (db=UNIREF evalue=9.0e-105 bit_score=382.0 identity=97.92 coverage=98.9637305699482)
outer membrane lipoprotein
LolB (db=HMMPfam db_id=PF03550 from=39 to=191 evalue=2.9e-40 interpro_id=IPR004565 interpro_description=Outer membrane lipoprotein LolB GO=Cellular Component: cell outer membrane (GO:0009279), Biological Process: protein transport (GO:0015031))
Prokaryotic lipoproteins and lipoprotein localization factors (db=superfamily db_id=SSF89392 from=21 to=191 evalue=3.5e-35)
ACD6_116_5

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4023..4853
DNA (831bp) protein (277aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWX4_ACILW (db=UNIREF evalue=4.0e-148 bit_score=527.0 identity=97.45 coverage=98.9169675090253)
4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase
4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase
seg (db=Seg db_id=seg from=94 to=105)
ACD6_116_6
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5372..6325
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase n=18 Tax=Acinetobacter RepID=Q6F8I9_ACIAD (db=UNIREF evalue=2.0e-169 bit_score=598.0 identity=96.53 coverage=99.3710691823899)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
PRPP_SYNTHETASE (db=PatternScan db_id=PS00114 from=129 to=144 evalue=0.0 interpro_id=IPR000842 interpro_description=Phosphoribosyl pyrophosphate synthetase, conserved site GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: ribose phosphate diphosphokinase activity (GO:0004749), Biological Process: ribonucleoside monophosphate biosynthetic process (GO:0009156), Biological Process: cellular biosynthetic process (GO:0044249))
ACD6_116_7
Acinetobacter sp. CIP 64.7, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6424..6720
DNA (297bp) protein (99aa)
rplY; 50S ribosomal protein L25
RL25_ACIAD_Q6F8I8; (db=BlastProDom db_id=PD012503 from=17 to=97 evalue=3.0e-33 interpro_id=IPR020055 interpro_description=Ribosomal protein L25, N-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
Ribosomal_L25p (db=HMMPfam db_id=PF01386 from=6 to=95 evalue=4.0e-27 interpro_id=IPR020055 interpro_description=Ribosomal protein L25, N-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: 5S rRNA binding (GO:0008097))
Ribosomal protein L25-like (db=superfamily db_id=SSF50715 from=3 to=98 evalue=3.8e-25 interpro_id=IPR011035 interpro_description=Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO=Biological Process: translation (GO:0006412))
ACD6_116_8

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6739..7320
DNA (582bp) protein (194aa)
Peptidyl-tRNA hydrolase n=2 Tax=Acinetobacter RepID=D0SBH5_ACIJO (db=UNIREF evalue=2.0e-96 bit_score=354.0 identity=93.78 coverage=98.9690721649485)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
peptidyl-tRNA hydrolase (EC:3.1.1.29)
seg (db=Seg db_id=seg from=109 to=117)
ACD6_116_9
Acinetobacter sp. CIP 51.11, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7465..7845
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase
Aspartate 1-decarboxylase alpha chain n=18 Tax=Acinetobacter RepID=PAND_ACIAD (db=UNIREF evalue=9.0e-64 bit_score=245.0 identity=92.86 coverage=98.4251968503937)
Asp_decarbox (db=BlastProDom db_id=PD009294 from=5 to=123 evalue=0.0 interpro_id=IPR003190 interpro_description=Aspartate decarboxylase GO=Molecular Function: aspartate 1-decarboxylase activity (GO:0004068), Biological Process: alanine biosynthetic process (GO:0006523))
Asp_decarbox (db=HMMPIR db_id=PIRSF006246 from=1 to=120 evalue=7.90003079443025e-61 interpro_id=IPR003190 interpro_description=Aspartate decarboxylase GO=Molecular Function: aspartate 1-decarboxylase activity (GO:0004068), Biological Process: alanine biosynthetic process (GO:0006523))
ACD6_116_10

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comp(7924..8508)
DNA (585bp) protein (195aa)
hypothetical protein
seg (db=Seg db_id=seg from=61 to=72)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=22)
Uncharacterized protein {ECO:0000313|EMBL:EKE23143.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_116_11

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comp(8505..10310)
DNA (1806bp) protein (602aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWY0_ACILW (db=UNIREF evalue=2.0e-130 bit_score=470.0 identity=59.69 coverage=95.8471760797342)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=257 to=279)
transmembrane_regions (db=TMHMM db_id=tmhmm from=288 to=310)
ACD6_116_12

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10742..11401
DNA (660bp) protein (220aa)
34 dihydroxy-2-butanone-4-phosphate synthase n=9 Tax=Acinetobacter RepID=A3M2W7_ACIBT (db=UNIREF evalue=7.0e-113 bit_score=409.0 identity=89.5 coverage=99.0909090909091)
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP synthase)
ribB: 3,4-dihydroxy-2-butanone-4-phosphate s (db=HMMTigr db_id=TIGR00506 from=17 to=214 evalue=1.3e-103 interpro_id=IPR000422 interpro_description=DHBP synthase RibB GO=Molecular Function: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity (GO:0008686), Biological Process: riboflavin biosynthetic process (GO:0009231))
ACD6_116_13

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comp(11467..12078)
DNA (612bp) protein (204aa)
Putative threonine efflux protein
seg (db=Seg db_id=seg from=50 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=180 to=202)
transmembrane_regions (db=TMHMM db_id=tmhmm from=146 to=168)
ACD6_116_14
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12149..12712)
DNA (564bp) protein (188aa)
hypothetical protein
seg (db=Seg db_id=seg from=152 to=171)
DUF1289 (db=HMMPfam db_id=PF06945 from=33 to=83 evalue=2.0e-15 interpro_id=IPR010710 interpro_description=Protein of unknown function DUF1289)
Uncharacterized protein n=11 Tax=Acinetobacter RepID=N8TTX4_ACILW
ACD6_116_15
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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12836..13768
DNA (933bp) protein (311aa)
UPF0176 protein A1S_2708 n=6 Tax=Acinetobacter RepID=A3M877_ACIBT (db=UNIREF evalue=1.0e-170 bit_score=602.0 identity=92.26 coverage=99.3569131832797)
putative sulfurtransferase
putative sulfurtransferase
RHODANESE-LIKE DOMAIN-CONTAINING (db=HMMPanther db_id=PTHR18838 from=21 to=301 evalue=5.9e-93)
ACD6_116_16
Acinetobacter sp. MII, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13975..14253
DNA (279bp) protein (93aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=38 to=60)
seg (db=Seg db_id=seg from=43 to=57)
Uncharacterized protein {ECO:0000313|EMBL:KGH51504.1}; TaxID=1507807 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
ACD6_116_17

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14539..14988
DNA (450bp) protein (150aa)
Alkaline phosphatase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWY5_ACILW (db=UNIREF evalue=2.0e-73 bit_score=277.0 identity=99.33 coverage=98.6666666666667)
DedA family protein
seg (db=Seg db_id=seg from=125 to=137)
transmembrane_regions (db=TMHMM db_id=tmhmm from=122 to=139)
ACD6_116_18

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15016..15450
DNA (435bp) protein (145aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=106 to=128)
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=43)
seg (db=Seg db_id=seg from=28 to=45)
ACD6_116_19
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15512..16036)
DNA (525bp) protein (175aa)
Metal-binding protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWY7_ACILW (db=UNIREF evalue=4.0e-96 bit_score=353.0 identity=100.0 coverage=98.8571428571429)
hypothetical protein
hypothetical protein
YgfB_YecA (db=superfamily db_id=SSF101327 from=3 to=174 evalue=1.29999924468179e-26 interpro_id=IPR011978 interpro_description=Uncharacterised protein family UPF0149 (YgfB))
ACD6_116_20
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16108..16314)
DNA (207bp) protein (69aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESJ95000.1}; TaxID=1400346 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter lwof
Uncharacterized protein n=1 Tax=Acinetobacter lwoffii NCTC 5866 = CIP 64.10 RepID=N9FMG2_ACILW
ACD6_116_21

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16714..18600
DNA (1887bp) protein (629aa)
RNA polymerase sigma factor n=4 Tax=Acinetobacter RepID=D0SWY9_ACILW (db=UNIREF evalue=0.0 bit_score=1125.0 identity=100.0 coverage=99.6820349761526)
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
SIGMA70_2 (db=PatternScan db_id=PS00716 from=586 to=612 evalue=0.0 interpro_id=IPR000943 interpro_description=RNA polymerase sigma-70 factor GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
ACD6_116_22
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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18796..19029
DNA (234bp) protein (78aa)
hypothetical protein
DUF493 (db=HMMPfam db_id=PF04359 from=1 to=77 evalue=4.0e-20 interpro_id=IPR007454 interpro_description=Protein of unknown function DUF493)
YbeD-like (db=superfamily db_id=SSF117991 from=1 to=77 evalue=6.4e-16)
Uncharacterized protein n=11 Tax=Bacteria RepID=N8Q895_9GAMM
ACD6_116_23
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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19181..19840
DNA (660bp) protein (220aa)
Octanoyltransferase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWZ1_ACILW (db=UNIREF evalue=7.0e-124 bit_score=446.0 identity=97.69 coverage=97.7272727272727)
lipB; lipoate-protein ligase B (lipoate biosynthesis protein B)
lipB; lipoate-protein ligase B (lipoate biosynthesis protein B)
LIPB (db=PatternScan db_id=PS01313 from=76 to=91 evalue=0.0 interpro_id=IPR020605 interpro_description=Octanoyltransferase, conserved site GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: lipoate biosynthetic process (GO:0009107), Molecular Function: octanoyltransferase activity (GO:0016415))
ACD6_116_24

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19915..20448
DNA (534bp) protein (178aa)
Putative uncharacterized protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0SWZ2_ACILW (db=UNIREF evalue=5.0e-89 bit_score=329.0 identity=99.44 coverage=98.876404494382)
hypothetical protein
seg (db=Seg db_id=seg from=150 to=163)
Uncharacterized protein {ECO:0000313|EMBL:EKE23130.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_116_25
Acinetobacter sp. MII, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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20450..20977
DNA (528bp) protein (176aa)
alcohol dehydrogenase (EC:1.1.1.1)
alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase n=2 Tax=Acinetobacter RepID=D0SBF6_ACIJO (db=UNIREF evalue=4.0e-84 bit_score=313.0 identity=93.18 coverage=99.4318181818182)
seg (db=Seg db_id=seg from=60 to=71)
Displaying 25 items

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