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ACD6_120

Alias: ACD6_32995.8574.15

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_120_1
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2..205)
DNA (204bp) protein (68aa)
tnpA; ISSod2 transposase TnpA_ISSod2
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=68 evalue=4.2e-10 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
rve (db=HMMPfam db_id=PF00665 from=8 to=68 evalue=1.2e-08 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
INTEGRASE (db=ProfileScan db_id=PS50994 from=1 to=68 evalue=8.793 interpro_id=IPR001584 interpro_description=Integrase, catalytic core GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA integration (GO:0015074))
ACD6_120_2
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(344..673)
DNA (330bp) protein (110aa)
putative IS3 family transposase
Transposase_8 (db=HMMPfam db_id=PF01527 from=7 to=54 evalue=0.00025 interpro_id=IPR002514 interpro_description=Transposase IS3/IS911 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Uncharacterized protein {ECO:0000313|EMBL:ENW31926.1}; TaxID=1217667 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter lwof
Uncharacterized protein n=1 Tax=Acinetobacter baumannii NIPH 70 RepID=N9IFQ8_ACIBA
ACD6_120_3
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1654..2175
DNA (522bp) protein (174aa)
Predicted protein n=2 Tax=Acinetobacter lwoffii SH145 RepID=D0T053_ACILW (db=UNIREF evalue=3.0e-97 bit_score=357.0 identity=100.0 coverage=98.8505747126437)
MobC (db=HMMPfam db_id=PF05713 from=93 to=113 evalue=9.5e-05 interpro_id=IPR008687 interpro_description=Bacterial mobilisation)
Bacterial mobilization family protein {ECO:0000313|EMBL:EXA60483.1}; TaxID=1310605 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N9APB3_9GAMM
ACD6_120_4
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2179..4689
DNA (2511bp) protein (837aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0T051_ACILW (db=UNIREF evalue=0.0 bit_score=784.0 identity=100.0 coverage=46.3560334528077)
relaxase/mobilization nuclease family protein
seg (db=Seg db_id=seg from=211 to=222)
seg (db=Seg db_id=seg from=818 to=830)
ACD6_120_5
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4706..5056)
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:ENW31929.1}; TaxID=1217667 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter lwof
Uncharacterized protein n=3 Tax=Acinetobacter RepID=N9SH74_9GAMM
ACD6_120_6
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5618..5962
DNA (345bp) protein (115aa)
hypothetical protein
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=11 to=78 evalue=4.5e-09 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_3 (db=HMMPfam db_id=PF01381 from=20 to=66 evalue=2.2e-07 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=16 to=67 evalue=2.9e-06)
ACD6_120_7
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6135..6818
DNA (684bp) protein (228aa)
Predicted protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0T048_ACILW (db=UNIREF evalue=2.0e-130 bit_score=467.0 identity=100.0 coverage=99.1228070175439)
serine/threonine-protein phosphatase 2
SER_THR_PHOSPHATASE (db=PatternScan db_id=PS00125 from=73 to=78 evalue=0.0 interpro_id=IPR006186 interpro_description=Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO=Molecular Function: hydrolase activity (GO:0016787))
G3DSA:3.60.21.10 (db=Gene3D db_id=G3DSA:3.60.21.10 from=2 to=226 evalue=6.29998179434732e-39)
ACD6_120_8
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7900..8610)
DNA (711bp) protein (237aa)
Integrase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0T047_ACILW (db=UNIREF evalue=8.0e-140 bit_score=499.0 identity=100.0 coverage=99.1561181434599)
transposase
transposase
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=2 to=159 evalue=4.7e-19 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
Displaying 8 items

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