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ACD6_193

Alias: ACD6_298636.2941.5

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_193_1
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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3..131
DNA (129bp) protein (43aa)
30S ribosomal protein S3
30S ribosomal protein S3 n=2 Tax=Borrelia RepID=RS3_BORDL (db=UNIREF evalue=3.0e-09 bit_score=64.3 identity=70.0 coverage=90.6976744186046)
30S/40S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760 from=1 to=31 evalue=1.0e-12)
Ribosomal protein S3 C-terminal domain (db=superfamily db_id=SSF54821 from=1 to=29 evalue=2.2e-09 interpro_id=IPR001351 interpro_description=Ribosomal protein S3, C-terminal GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD6_193_2
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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135..548
DNA (414bp) protein (138aa)
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 n=8 Tax=Legionella RepID=RL16_LEGPA (db=UNIREF evalue=9.0e-49 bit_score=195.0 identity=70.8 coverage=98.5507246376812)
seg (db=Seg db_id=seg from=111 to=123)
rplP_bact: ribosomal protein L16 (db=HMMTigr db_id=TIGR01164 from=2 to=127 evalue=1.2e-78 interpro_id=IPR000114 interpro_description=Ribosomal protein L16 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD6_193_3
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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548..742
DNA (195bp) protein (65aa)
seg (db=Seg db_id=seg from=13 to=24)
Ribosomal_L29 (db=HMMPfam db_id=PF00831 from=4 to=59 evalue=6.3e-20 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L29: ribosomal protein L29 (db=HMMTigr db_id=TIGR00012 from=5 to=60 evalue=6.9e-20 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L29 (L29p) (db=superfamily db_id=SSF46561 from=1 to=59 evalue=1.2e-15 interpro_id=IPR001854 interpro_description=Ribosomal protein L29 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD6_193_4
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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1048..1416
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N8Y3_9GAMM (db=UNIREF evalue=3.0e-52 bit_score=206.0 identity=81.97 coverage=98.3739837398374)
50S ribosomal protein L14
RIBOSOMAL_L14 (db=PatternScan db_id=PS00049 from=60 to=86 evalue=0.0 interpro_id=IPR019972 interpro_description=Ribosomal protein L14 conserved site)
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=122 evalue=5.8e-83 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
ACD6_193_5
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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1419..1736
DNA (318bp) protein (106aa)
rplX; 50S ribosomal protein L24
50S ribosomal protein L24 n=1 Tax=Alkalilimnicola ehrlichii MLHE-1 RepID=RL24_ALHEH (db=UNIREF evalue=5.0e-28 bit_score=126.0 identity=57.14 coverage=96.2264150943396)
RIBOSOMAL_L24 (db=PatternScan db_id=PS01108 from=7 to=24 evalue=0.0 interpro_id=IPR005825 interpro_description=Ribosomal protein L24/L26, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rplX_bact: ribosomal protein L24 (db=HMMTigr db_id=TIGR01079 from=1 to=102 evalue=1.2e-42 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD6_193_6
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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1867..2343
DNA (477bp) protein (159aa)
50S ribosomal protein L5 n=2 Tax=Chromobacterium group RepID=RL5_CHRVO (db=UNIREF evalue=3.0e-65 bit_score=249.0 identity=75.82 coverage=95.5974842767296)
rplE; 50S ribosomal protein L5
RIBOSOMAL_L5 (db=PatternScan db_id=PS00358 from=32 to=48 evalue=0.0 interpro_id=IPR020929 interpro_description=Ribosomal protein L5, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L5 (db=HMMPanther db_id=PTHR11994:SF4 from=1 to=158 evalue=5.2e-84)
ACD6_193_7
R_Gammaproteobacteria_42_10, Gammaproteobacteria, Proteobacteria, Bacteria

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2347..2652
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=3 Tax=Proteobacteria RepID=RS14_ALTMD (db=UNIREF evalue=5.0e-21 bit_score=103.0 identity=49.5 coverage=98.0392156862745)
30S ribosomal protein S14
CHLOROPLAST 30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836:SF1 from=1 to=101 evalue=1.3e-37)
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836 from=1 to=101 evalue=1.3e-37 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD6_193_8

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2676..2975
DNA (300bp) protein (100aa)
30S ribosomal protein S8 n=1 Tax=Dechloromonas aromatica RCB RepID=RS8_DECAR (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=55.0 coverage=99.0)
rpsH; 30S ribosomal protein S8
Ribosomal protein S8 (db=superfamily db_id=SSF56047 from=4 to=100 evalue=1.5e-28 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S8 (db=HMMPfam db_id=PF00410 from=5 to=100 evalue=2.2e-28 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying 8 items

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