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ACD6_252

Alias: ACD6_38011.5842.12

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_252_1

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comp(1..948)
DNA (948bp) protein (316aa)
Benzoate 12-dioxygenase electron transfer component n=3 Tax=Acinetobacter RepID=A3M3Z9_ACIBT (db=UNIREF evalue=9.0e-175 bit_score=616.0 identity=92.41 coverage=99.6835443037975)
2-polyprenylphenol 6-hydroxylase
2-polyprenylphenol 6-hydroxylase
2FE2S_FER_1 (db=PatternScan db_id=PS00197 from=41 to=49 evalue=0.0 interpro_id=IPR006058 interpro_description=2Fe-2S ferredoxin, iron-sulphur binding site GO=Molecular Function: electron carrier activity (GO:0009055))
ACD6_252_2

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comp(1039..1530)
DNA (492bp) protein (164aa)
small subunit of phenylpropionate dioxygenase
small subunit of phenylpropionate dioxygenase
Benzoate 12-dioxygenase beta subunit n=13 Tax=Acinetobacter RepID=A3M400_ACIBT (db=UNIREF evalue=1.0e-82 bit_score=308.0 identity=90.57 coverage=96.3414634146341)
benzo_1_2_benB: benzoate 1,2-dioxygena (db=HMMTigr db_id=TIGR03232 from=9 to=163 evalue=2.9e-109 interpro_id=IPR017641 interpro_description=Benzoate 1,2-dioxygenase, small subunit)
ACD6_252_3

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comp(1527..2915)
DNA (1389bp) protein (463aa)
Benzoate 1,2-dioxygenase alpha subunit n=9 Tax=Acinetobacter RepID=B0VAN7_ACIBY (db=UNIREF evalue=0.0 bit_score=883.0 identity=89.39 coverage=99.1360691144708)
benA; phenylpropionate dioxygenase
benA; phenylpropionate dioxygenase
RING_HYDROXYL_ALPHA (db=PatternScan db_id=PS00570 from=95 to=118 evalue=0.0 interpro_id=IPR015881 interpro_description=Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (GO:0016705), Molecular Function: 2 iron, 2 sulfur cluster binding (GO:0051537), Biological Process: oxidation reduction (GO:0055114))
ACD6_252_4
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2987..3553)
DNA (567bp) protein (189aa)
Protocatechuate 3,4-dioxygenase beta subunit n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S9D4_ACIJO (db=UNIREF evalue=4.0e-98 bit_score=360.0 identity=88.83 coverage=98.9417989417989)
Protocatechuate 3,4-dioxygenase beta subunit
Protocatechuate 3,4-dioxygenase beta subunit
INTRADIOL_DIOXYGENAS (db=PatternScan db_id=PS00083 from=15 to=43 evalue=0.0 interpro_id=IPR000627 interpro_description=Intradiol ring-cleavage dioxygenase, C-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: cellular aromatic compound metabolic process (GO:0006725), Molecular Function: ferric iron binding (GO:0008199), Biological Process: oxidation reduction (GO:0055114))
ACD6_252_5

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comp(4149..4439)
DNA (291bp) protein (97aa)
Muconolactone delta-isomerase (MIase) n=16 Tax=Acinetobacter RepID=B0VQE8_ACIBS (db=UNIREF evalue=6.0e-46 bit_score=186.0 identity=90.62 coverage=97.9381443298969)
catC; muconolactone delta-isomerase (EC:5.3.3.4)
muco_delta: muconolactone delta-isomerase (db=HMMTigr db_id=TIGR03221 from=2 to=91 evalue=1.7e-62 interpro_id=IPR003464 interpro_description=Muconolactone delta-isomerase GO=Biological Process: cellular aromatic compound metabolic process (GO:0006725))
MIase (db=HMMPfam db_id=PF02426 from=1 to=91 evalue=1.1e-48 interpro_id=IPR003464 interpro_description=Muconolactone delta-isomerase GO=Biological Process: cellular aromatic compound metabolic process (GO:0006725))
possibly catechol breakdown path Jill Banfield (11/16/12)
ACD6_252_6

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comp(4453..5562)
DNA (1110bp) protein (370aa)
Muconate cycloisomerase I n=1 Tax=Acinetobacter johnsonii SH046 RepID=D0S9D2_ACIJO (db=UNIREF evalue=0.0 bit_score=653.0 identity=85.33 coverage=99.1891891891892)
muconate cycloisomerase
muconate cycloisomerase
MR_MLE_2 (db=PatternScan db_id=PS00909 from=191 to=222 evalue=0.0 interpro_id=IPR018110 interpro_description=Mandelate racemase/muconate lactonizing enzyme, conserved site GO=Biological Process: cellular amino acid catabolic process (GO:0009063))
ACD6_252_7
Acinetobacter sp. NIPH 899, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5678..5878
DNA (201bp) protein (67aa)
transcriptional regulator
HTH_1 (db=HMMPfam db_id=PF00126 from=3 to=62 evalue=4.8e-26 interpro_id=IPR000847 interpro_description=HTH transcriptional regulator, LysR GO=Molecular Function: transcription factor activity (GO:0003700), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=1 to=67 evalue=6.5e-23)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=1 to=67 evalue=5.5e-21 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
Displaying 7 items

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