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ACD6_295

Alias: ACD6_4429.9258.13

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_295_1
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15..566)
DNA (552bp) protein (184aa)
General secretion pathway protein H n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0ST96_ACILW (db=UNIREF evalue=2.0e-96 bit_score=353.0 identity=93.99 coverage=98.9130434782609)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
PROKAR_NTER_METHYL (db=PatternScan db_id=PS00409 from=10 to=30 evalue=0.0 interpro_id=IPR001120 interpro_description=Prokaryotic N-terminal methylation site)
ACD6_295_2
Acinetobacter sp. MII, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(576..1190)
DNA (615bp) protein (205aa)
Transcriptional regulator n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0ST97_ACILW (db=UNIREF evalue=2.0e-97 bit_score=358.0 identity=99.51 coverage=98.5365853658537)
transcriptional regulator
transcriptional regulator
seg (db=Seg db_id=seg from=82 to=93)
ACD6_295_3
Acinetobacter sp. CIP 101966, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1232..2005)
DNA (774bp) protein (258aa)
Mg-dependent DNase n=2 Tax=Acinetobacter RepID=D0SEA4_ACIJO (db=UNIREF evalue=7.0e-131 bit_score=469.0 identity=91.83 coverage=99.2248062015504)
ycfH; putative deoxyribonuclease
ycfH; putative deoxyribonuclease
seg (db=Seg db_id=seg from=4 to=15)
ACD6_295_4
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2033..2374)
DNA (342bp) protein (114aa)
pilZ; type 4 fimbrial biogenesis protein
PilZ (db=HMMPfam db_id=PF07238 from=29 to=84 evalue=4.69999999999999e-05 interpro_id=IPR009875 interpro_description=Type IV pilus assembly PilZ)
Uncharacterized protein {ECO:0000313|EMBL:ENW29899.1}; TaxID=1217667 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter lwof
Uncharacterized protein n=1 Tax=Acinetobacter bouvetii DSM 14964 = CIP 107468 RepID=N9CBG3_9GAMM
ACD6_295_5

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comp(2390..3370)
DNA (981bp) protein (327aa)
DNA polymerase III delta prime subunit n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STA0_ACILW (db=UNIREF evalue=6.0e-176 bit_score=620.0 identity=96.93 coverage=99.388379204893)
holB; DNA polymerase III subunit delta'
holB; DNA polymerase III subunit delta'
seg (db=Seg db_id=seg from=192 to=207)
ACD6_295_6

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comp(3385..4146)
DNA (762bp) protein (254aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STA1_ACILW (db=UNIREF evalue=7.0e-142 bit_score=506.0 identity=97.23 coverage=99.2125984251969)
CMP-2-keto-3-deoxyoctulosonic acid synthetase
CMP-2-keto-3-deoxyoctulosonic acid synthetase
kdsB: 3-deoxy-D-manno-octulosonate cytidylyl (db=HMMTigr db_id=TIGR00466 from=1 to=242 evalue=1.1e-94 interpro_id=IPR004528 interpro_description=3-deoxy-D-manno-octulosonate cytidylyltransferase GO=Cellular Component: cytoplasm (GO:0005737), Molecular Function: 3-deoxy-manno-octulosonate cytidylyltransferase activity (GO:0008690), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
ACD6_295_7
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4159..5163)
DNA (1005bp) protein (335aa)
Tetraacyldisaccharide 4'-kinase n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STA2_ACILW (db=UNIREF evalue=0.0 bit_score=665.0 identity=98.5 coverage=99.4029850746269)
lpxK; tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130) rbh
lpxK; tetraacyldisaccharide 4'-kinase (Lipid A 4'-kinase) (EC:2.7.1.130) rbh
seg (db=Seg db_id=seg from=322 to=328)
ACD6_295_8

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comp(5167..6894)
DNA (1728bp) protein (576aa)
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STA3_ACILW (db=UNIREF evalue=0.0 bit_score=1036.0 identity=99.48 coverage=99.6527777777778)
msbA; lipid ABC transporter membrane/ATP-binding protein
msbA; lipid ABC transporter membrane/ATP-binding protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=265)
ACD6_295_9
Acinetobacter sp. CIP A162, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6894..7316)
DNA (423bp) protein (141aa)
exbD; biopolymer transport protein ExbD/TolR
ExbD (db=HMMPfam db_id=PF02472 from=10 to=134 evalue=2.2e-21 interpro_id=IPR003400 interpro_description=Biopolymer transport protein ExbD/TolR GO=Molecular Function: transporter activity (GO:0005215), Biological Process: transport (GO:0006810), Cellular Component: membrane (GO:0016020))
Uncharacterized protein {ECO:0000313|EMBL:ENU17123.1}; TaxID=1144674 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp.
Uncharacterized protein n=2 Tax=Acinetobacter RepID=N9CBF9_9GAMM
ACD6_295_10
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7327..7965)
DNA (639bp) protein (213aa)
MotA/TolQ/ExbB proton channel family protein n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STA5_ACILW (db=UNIREF evalue=9.0e-109 bit_score=395.0 identity=96.7 coverage=99.0610328638498)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=27)
seg (db=Seg db_id=seg from=118 to=127)
ACD6_295_11
Acinetobacter sp. CIP 102136, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7999..8886)
DNA (888bp) protein (296aa)
Chromosome partitioning protein parB n=1 Tax=Acinetobacter lwoffii SH145 RepID=D0STA6_ACILW (db=UNIREF evalue=9.0e-167 bit_score=589.0 identity=99.66 coverage=99.3243243243243)
transcriptional regulator
transcriptional regulator
coiled-coil (db=Coil db_id=coil from=114 to=135 evalue=NA)
ACD6_295_12
Acinetobacter lwoffii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8883..9296)
DNA (414bp) protein (138aa)
soj; chromosome partitioning protein
seg (db=Seg db_id=seg from=127 to=136)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=130 evalue=7.7e-28)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=127 evalue=1.9e-23)
Displaying 12 items

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