ggKbase home page

ACD6_371

Alias: ACD6p_86766.14881.13

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD6_371_1

Not on your lists

comp(3..1865)
DNA (1863bp) protein (621aa)
fagellar hook-basal body proteins
seg (db=Seg db_id=seg from=369 to=380)
seg (db=Seg db_id=seg from=186 to=201)
seg (db=Seg db_id=seg from=222 to=241)
ACD6_371_2

Not on your lists

comp(1933..2364)
DNA (432bp) protein (144aa)
Flagellar operon protein n=4 Tax=Clostridium thermocellum RepID=A3DCN2_CLOTH (db=UNIREF evalue=2.0e-20 bit_score=101.0 identity=52.58 coverage=63.8888888888889)
flagellar operon protein
flg_new: flagellar operon protein (db=HMMTigr db_id=TIGR02530 from=36 to=128 evalue=1.7e-28 interpro_id=IPR013367 interpro_description=Flagellar, putative)
(db=HMMPfam db_id=PF12611 from=105 to=127 evalue=5.0e-06 interpro_id=IPR013367 interpro_description=Flagellar, putative)
ACD6_371_3

Not on your lists

comp(2370..2792)
DNA (423bp) protein (141aa)
flagellar hook capping protein
Flagellar hook capping protein n=1 Tax=Sphaerobacter thermophilus DSM 20745 RepID=D1C163_SPHTD (db=UNIREF evalue=1.0e-14 bit_score=82.0 identity=36.28 coverage=78.0141843971631)
seg (db=Seg db_id=seg from=15 to=20)
(db=HMMPfam db_id=PF03963 from=6 to=127 evalue=8.5e-25 interpro_id=IPR005648 interpro_description=Flagellar hook capping protein)
ACD6_371_4

Not on your lists

comp(2802..4226)
DNA (1425bp) protein (475aa)
flagellar hook-length control protein
seg (db=Seg db_id=seg from=55 to=66)
coiled-coil (db=Coil db_id=coil from=404 to=425 evalue=NA)
coiled-coil (db=Coil db_id=coil from=82 to=103 evalue=NA)
ACD6_371_5

Not on your lists

comp(4229..4639)
DNA (411bp) protein (137aa)
flgB; flagellar basal-body rod protein FlgB
seg (db=Seg db_id=seg from=13 to=27)
seg (db=Seg db_id=seg from=74 to=85)
seg (db=Seg db_id=seg from=123 to=131)
ACD6_371_6

Not on your lists

comp(4649..5155)
DNA (507bp) protein (169aa)
lytic transglycosylase catalytic subunit
seg (db=Seg db_id=seg from=10 to=22)
Lysozyme-like (db=superfamily db_id=SSF53955 from=43 to=164 evalue=3.7e-43 interpro_id=IPR023346 interpro_description=Lysozyme-like domain)
no description (db=Gene3D db_id=G3DSA:1.10.530.10 from=44 to=164 evalue=3.9e-41)
ACD6_371_7

Not on your lists

comp(5148..5612)
DNA (465bp) protein (155aa)
coiled-coil (db=Coil db_id=coil from=87 to=108 evalue=NA)
(db=HMMPfam db_id=PF02050 from=4 to=138 evalue=2.2e-14 interpro_id=IPR012823 interpro_description=Flagellar export FliJ GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Biological Process: chemotaxis (GO:0006935), Cellular Component: bacterial-type flagellum (GO:0009288), Cellular Component: membrane (GO:0016020), Cellular Component: bacterial-type flagellum part (GO:0044461))
Uncharacterized protein {ECO:0000313|EMBL:EKE22312.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_371_8

Not on your lists

comp(5614..6939)
DNA (1326bp) protein (442aa)
flagellar protein export ATPase FliI (EC:3.6.3.14)
flagellar protein export ATPase FliI (EC:3.6.3.14)
Flagellar protein export ATPase FliI n=1 Tax=Desulfotomaculum kuznetsovii DSM 6115 RepID=F6CJ25_9FIRM (db=UNIREF evalue=1.0e-139 bit_score=500.0 identity=61.02 coverage=96.3800904977376)
seg (db=Seg db_id=seg from=98 to=111)
ACD6_371_9

Not on your lists

comp(6939..7817)
DNA (879bp) protein (293aa)
seg (db=Seg db_id=seg from=104 to=120)
(db=HMMPfam db_id=PF02108 from=153 to=276 evalue=7.4e-11 interpro_id=IPR018035 interpro_description=Flagellar assembly protein FliH/Type III secretion system HrpE)
Uncharacterized protein {ECO:0000313|EMBL:EKE22314.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
flagellar assembly protein FliH/type III secretion system HrpE
ACD6_371_10
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7801..8073)
DNA (273bp) protein (91aa)
seg (db=Seg db_id=seg from=72 to=84)
seg (db=Seg db_id=seg from=9 to=27)
(db=HMMPfam db_id=PF01706 from=4 to=79 evalue=4.5e-18 interpro_id=IPR023087 interpro_description=Flagellar motor switch protein FliG, C-terminal)
FliG (db=superfamily db_id=SSF48029 from=8 to=89 evalue=2.3e-16 interpro_id=IPR011002 interpro_description=Flagellar motor switch protein FliG, alpha-helical)
ACD6_371_11
GWF2_RBX1_38_17_curated, RBX1, Bacteria

Not on your lists

comp(8028..8462)
DNA (435bp) protein (145aa)
flagellar motor switch protein FliG
Flagellar motor switch protein FliG n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HN41_9FIRM (db=UNIREF evalue=4.0e-22 bit_score=107.0 identity=47.1 coverage=93.7931034482759)
seg (db=Seg db_id=seg from=110 to=125)
FliG (db=superfamily db_id=SSF48029 from=1 to=139 evalue=4.3e-28 interpro_id=IPR011002 interpro_description=Flagellar motor switch protein FliG, alpha-helical)
ACD6_371_12
Pseudothermotoga thermarum, Pseudothermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(8476..9081)
DNA (606bp) protein (202aa)
flagellar motor switch protein FliG
seg (db=Seg db_id=seg from=58 to=69)
FLGMOTORFLIG (db=FPrintScan db_id=PR00954 from=7 to=23 evalue=2.7e-19 interpro_id=IPR000090 interpro_description=Flagellar motor switch protein FliG GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Biological Process: chemotaxis (GO:0006935), Cellular Component: bacterial-type flagellum (GO:0009288))
FLGMOTORFLIG (db=FPrintScan db_id=PR00954 from=36 to=62 evalue=2.7e-19 interpro_id=IPR000090 interpro_description=Flagellar motor switch protein FliG GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Biological Process: chemotaxis (GO:0006935), Cellular Component: bacterial-type flagellum (GO:0009288))
ACD6_371_13

Not on your lists

comp(9084..10706)
DNA (1623bp) protein (541aa)
flagellar M-ring protein FliF
Flagellar M-ring protein FliF n=1 Tax=Syntrophobotulus glycolicus DSM 8271 RepID=F0SZF3_SYNGF (db=UNIREF evalue=4.0e-68 bit_score=263.0 identity=34.56 coverage=97.2273567467653)
seg (db=Seg db_id=seg from=23 to=38)
seg (db=Seg db_id=seg from=216 to=237)
ACD6_371_14

Not on your lists

comp(10725..11030)
DNA (306bp) protein (102aa)
flagellar hook-basal body protein FliE
(db=HMMPfam db_id=PF02049 from=14 to=101 evalue=5.7e-25 interpro_id=IPR001624 interpro_description=Flagellar hook-basal body complex protein FliE GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: bacterial-type flagellum (GO:0009288))
fliE: flagellar hook-basal body complex prot (db=HMMTigr db_id=TIGR00205 from=1 to=101 evalue=2.1e-14 interpro_id=IPR001624 interpro_description=Flagellar hook-basal body complex protein FliE GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: bacterial-type flagellum (GO:0009288))
FLGHOOKFLIE (db=FPrintScan db_id=PR01006 from=86 to=99 evalue=7.3e-08 interpro_id=IPR001624 interpro_description=Flagellar hook-basal body complex protein FliE GO=Biological Process: ciliary or flagellar motility (GO:0001539), Molecular Function: motor activity (GO:0003774), Molecular Function: structural molecule activity (GO:0005198), Cellular Component: bacterial-type flagellum (GO:0009288))
ACD6_371_15

Not on your lists

comp(11047..11502)
DNA (456bp) protein (152aa)
Flagellar basal-body rod protein FlgC n=4 Tax=Clostridium thermocellum RepID=A3DCM2_CLOTH (db=UNIREF evalue=8.0e-39 bit_score=162.0 identity=49.01 coverage=96.0526315789474)
flagellar basal-body rod protein FlgC
FlgC: flagellar basal-body rod protein FlgC (db=HMMTigr db_id=TIGR01395 from=4 to=151 evalue=4.9e-62 interpro_id=IPR006299 interpro_description=Flagellar basal-body rod protein FlgC GO=Cellular Component: flagellum (GO:0019861))
(db=HMMPfam db_id=PF06429 from=111 to=149 evalue=1.6e-13 interpro_id=IPR010930 interpro_description=Domain of unknown function DUF1078, C-terminal GO=Cellular Component: flagellum (GO:0019861))
ACD6_371_16

Not on your lists

comp(11675..12043)
DNA (369bp) protein (123aa)
Flagellar export chaperone FliS (db=superfamily db_id=SSF101116 from=5 to=106 evalue=7.2e-11 interpro_id=IPR003713 interpro_description=Flagellar protein FliS GO=Cellular Component: bacterial-type flagellum (GO:0009288), Biological Process: flagellum assembly (GO:0009296))
no description (db=Gene3D db_id=G3DSA:1.20.120.340 from=4 to=109 evalue=5.3e-09 interpro_id=IPR003713 interpro_description=Flagellar protein FliS GO=Cellular Component: bacterial-type flagellum (GO:0009288), Biological Process: flagellum assembly (GO:0009296))
(db=HMMPfam db_id=PF02561 from=9 to=98 evalue=0.0001 interpro_id=IPR003713 interpro_description=Flagellar protein FliS GO=Cellular Component: bacterial-type flagellum (GO:0009288), Biological Process: flagellum assembly (GO:0009296))
Uncharacterized protein {ECO:0000313|EMBL:EKE22303.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_371_17

Not on your lists

comp(12148..12474)
DNA (327bp) protein (109aa)
seg (db=Seg db_id=seg from=37 to=55)
(db=HMMPfam db_id=PF03646 from=28 to=97 evalue=2.7e-08 interpro_id=IPR005186 interpro_description=Flagellar protein FlaG protein)
Uncharacterized protein {ECO:0000313|EMBL:EKE22304.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD6_371_18

Not on your lists

comp(12549..14297)
DNA (1749bp) protein (583aa)
flagellar hook-associated 2 domain-containing protein
Flagellar hook-associated 2 domain protein n=1 Tax=Ammonifex degensii KC4 RepID=C9RAZ6_AMMDK (db=UNIREF evalue=9.0e-20 bit_score=102.0 identity=33.43 coverage=54.7169811320755)
seg (db=Seg db_id=seg from=4 to=19)
seg (db=Seg db_id=seg from=97 to=108)
Displaying 18 items

View Taxonomy