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ACD70_18

Alias: ACD70_400725.8765.6

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD70_18_1
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..1568)
DNA (1566bp) protein (522aa)
hypothetical protein
Hypothetical membrane spanning protein n=3 Tax=Coxiella burnetii RepID=B6J164_COXB2 (db=UNIREF evalue=2.0e-44 bit_score=183.0 identity=27.34 coverage=94.4444444444444)
transmembrane_regions (db=TMHMM db_id=tmhmm from=334 to=356)
transmembrane_regions (db=TMHMM db_id=tmhmm from=305 to=327)
ACD70_18_2
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1572..1859)
DNA (288bp) protein (96aa)
Amine oxidase n=2 Tax=Gluconacetobacter diazotrophicus PAl 5 RepID=B5ZCZ6_GLUDA (db=UNIREF evalue=2.0e-30 bit_score=134.0 identity=65.52 coverage=89.5833333333333)
amine oxidase
amine oxidase Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_43_curated
ACD70_18_3
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3056..4030)
DNA (975bp) protein (325aa)
UDP-glucose 4-epimerase n=1 Tax=Halothiobacillus neapolitanus c2 RepID=D0KZQ2_HALNC (db=UNIREF evalue=9.0e-102 bit_score=373.0 identity=54.06 coverage=97.8461538461539)
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase
galE: UDP-glucose 4-epimerase (db=HMMTigr db_id=TIGR01179 from=2 to=319 evalue=2.3e-154 interpro_id=IPR005886 interpro_description=UDP-glucose 4-epimerase GO=Molecular Function: UDP-glucose 4-epimerase activity (GO:0003978), Biological Process: galactose metabolic process (GO:0006012))
ACD70_18_4

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4937..5059
DNA (123bp) protein (41aa)
4937..5059 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44991.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD70_18_5
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7805..8341
DNA (537bp) protein (179aa)
ribosomal subunit interface protein domain/'cold-shock' DNA-binding domain-containing protein
Ribosome-associated factor Y n=7 Tax=Coxiella burnetii RepID=A9KBC8_COXBN (db=UNIREF evalue=5.0e-35 bit_score=150.0 identity=42.86 coverage=96.6480446927374)
coiled-coil (db=Coil db_id=coil from=12 to=36 evalue=NA)
Ribosome binding protein Y (YfiA homologue) (db=superfamily db_id=SSF69754 from=4 to=106 evalue=1.4e-17 interpro_id=IPR003489 interpro_description=Ribosomal protein S30Ae/sigma 54 modulation protein GO=Molecular Function: binding (GO:0005488), Biological Process: primary metabolic process (GO:0044238))
ACD70_18_6
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8346..8588)
DNA (243bp) protein (81aa)
8346..8588 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_43_curated
Displaying 6 items

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