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ACD70_37

Alias: ACD70_102175.7258.6

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD70_37_1
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..903)
DNA (903bp) protein (301aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=272 to=294)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=265)
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=209)
ACD70_37_2
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(897..1736)
DNA (840bp) protein (280aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Dinoroseobacter shibae DFL 12 RepID=ISPE_DINSH (db=UNIREF evalue=6.0e-40 bit_score=167.0 identity=39.15 coverage=95.3571428571429)
seg (db=Seg db_id=seg from=109 to=120)
seg (db=Seg db_id=seg from=95 to=106)
ACD70_37_3
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1720..1869)
DNA (150bp) protein (50aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YgbB (db=HMMPfam db_id=PF02542 from=1 to=44 evalue=2.5e-12 interpro_id=IPR003526 interpro_description=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core GO=Molecular Function: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (GO:0008685), Biological Process: terpenoid biosynthetic process (GO:0016114))
IpsF-like (db=superfamily db_id=SSF69765 from=1 to=44 evalue=6.4e-12 interpro_id=IPR003526 interpro_description=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core GO=Molecular Function: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (GO:0008685), Biological Process: terpenoid biosynthetic process (GO:0016114))
no description (db=Gene3D db_id=G3DSA:3.30.1330.50 from=1 to=41 evalue=8.6e-06 interpro_id=IPR003526 interpro_description=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core GO=Molecular Function: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity (GO:0008685), Biological Process: terpenoid biosynthetic process (GO:0016114))
ACD70_37_4
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2315..3358
DNA (1044bp) protein (348aa)
Pyridine nucleotide-disulphide oxidoreductase n=6 Tax=Coxiella burnetii RepID=A9NDY0_COXBR (db=UNIREF evalue=3.0e-110 bit_score=402.0 identity=54.96 coverage=99.4252873563218)
hypothetical protein
hypothetical protein
Nucleotide-binding domain (db=superfamily db_id=SSF51971 from=1 to=222 evalue=2.5e-17)
ACD70_37_5
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3381..3884
DNA (504bp) protein (168aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=140 to=159)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
seg (db=Seg db_id=seg from=111 to=127)
seg (db=Seg db_id=seg from=36 to=64)
ACD70_37_6

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comp(3998..5449)
DNA (1452bp) protein (484aa)
conserved membrane protein of unknown function
conserved membrane protein of unknown function
MFS transporter, DHA2 family, multidrug resistance protein B n=5 Tax=Legionella pneumophila RepID=D5TD47_LEGPN (db=UNIREF evalue=1.0e-106 bit_score=390.0 identity=48.25 coverage=94.0082644628099)
transmembrane_regions (db=TMHMM db_id=tmhmm from=440 to=462)
ACD70_37_7
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5450..6142
DNA (693bp) protein (231aa)
seg (db=Seg db_id=seg from=156 to=173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=25 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=151 to=173)
transmembrane_regions (db=TMHMM db_id=tmhmm from=188 to=210)
ACD70_37_8
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6242..6505
DNA (264bp) protein (88aa)
30S ribosomal protein S15 n=2 Tax=Methylophilaceae RepID=RS15_METFK (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=62.07 coverage=97.7272727272727)
30S ribosomal protein S15
S15_bact: ribosomal protein S15 (db=HMMTigr db_id=TIGR00952 from=2 to=87 evalue=9.7e-44 interpro_id=IPR005290 interpro_description=Ribosomal protein S15, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR (db=HMMPanther db_id=PTHR23321 from=4 to=86 evalue=7.0e-41)
ACD70_37_9
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6532..7290
DNA (759bp) protein (253aa)
polynucleotide phosphorylase/polyadenylase
polynucleotide phosphorylase/polyadenylase
Polyribonucleotide nucleotidyltransferase n=2 Tax=Aeromonas RepID=PNP_AERS4 (db=UNIREF evalue=2.0e-89 bit_score=331.0 identity=69.48 coverage=98.0237154150198)
seg (db=Seg db_id=seg from=129 to=141)
Displaying 9 items

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