ggKbase home page

ACD70_40

Alias: ACD70_128134.4349.5

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD70_40_1
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14..721)
DNA (708bp) protein (236aa)
queC; queuosine biosynthesis protein QueC
Uncharacterised conserved protein, ExsB type (db=HMMPIR db_id=PIRSF006293 from=5 to=227 evalue=1.1e-102 interpro_id=IPR004479 interpro_description=Exoenzyme S synthesis protein B/queuosine synthesis GO=Biological Process: queuosine biosynthetic process (GO:0008616), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
TIGR00364: exsB protein (db=HMMTigr db_id=TIGR00364 from=9 to=211 evalue=1.6e-76 interpro_id=IPR004479 interpro_description=Exoenzyme S synthesis protein B/queuosine synthesis GO=Biological Process: queuosine biosynthetic process (GO:0008616), Molecular Function: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (GO:0016810))
ExsB (db=HMMPfam db_id=PF06508 from=8 to=141 evalue=4.6e-51 interpro_id=IPR018317 interpro_description=Queuosine synthesis-like)
ACD70_40_2
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

761..1189
DNA (429bp) protein (143aa)
rhodanese-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
Rhodanese/Cell cycle control phosphatase (db=superfamily db_id=SSF52821 from=34 to=141 evalue=2.3e-25 interpro_id=IPR001763 interpro_description=Rhodanese-like)
no description (db=Gene3D db_id=G3DSA:3.40.250.10 from=39 to=140 evalue=3.9e-18 interpro_id=IPR001763 interpro_description=Rhodanese-like)
ACD70_40_3

Not on your lists

1191..1451
DNA (261bp) protein (87aa)
Glutaredoxin 3 n=1 Tax=Synechococcus sp. CC9311 RepID=Q0I6S6_SYNS3 (db=UNIREF evalue=7.0e-22 bit_score=106.0 identity=54.65 coverage=97.7011494252874)
Glutaredoxin, GrxC
GRX_bact: glutaredoxin (db=HMMTigr db_id=TIGR02181 from=4 to=83 evalue=1.0e-42 interpro_id=IPR011900 interpro_description=Glutaredoxin, GrxC GO=Biological Process: cell redox homeostasis (GO:0045454))
GLUTAREDOXIN, GRX (db=HMMPanther db_id=PTHR10168:SF10 from=3 to=83 evalue=3.7e-30)
ACD70_40_4

Not on your lists

1455..1961
DNA (507bp) protein (169aa)
secB; preprotein translocase subunit SecB
seg (db=Seg db_id=seg from=69 to=80)
seg (db=Seg db_id=seg from=155 to=168)
SecB (db=HMMPfam db_id=PF02556 from=12 to=156 evalue=6.9e-51 interpro_id=IPR003708 interpro_description=Bacterial protein export chaperone SecB GO=Biological Process: protein transport (GO:0015031), Molecular Function: unfolded protein binding (GO:0051082), Biological Process: protein tetramerization (GO:0051262))
ACD70_40_5
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1970..2953
DNA (984bp) protein (328aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Haemophilus ducreyi RepID=GPDA_HAEDU (db=UNIREF evalue=2.0e-92 bit_score=342.0 identity=51.24 coverage=97.2560975609756)
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
NAD_G3PDH (db=PatternScan db_id=PS00957 from=190 to=211 evalue=0.0 interpro_id=IPR006168 interpro_description=NAD-dependent glycerol-3-phosphate dehydrogenase GO=Molecular Function: glycerol-3-phosphate dehydrogenase (NAD+) activity (GO:0004367), Biological Process: glycerol-3-phosphate metabolic process (GO:0006072), Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331), Biological Process: oxidation reduction (GO:0055114))
Glycerol-3-phosphate dehydrogenase (NAD) (db=HMMPIR db_id=PIRSF000114 from=4 to=327 evalue=1.1e-115 interpro_id=IPR006168 interpro_description=NAD-dependent glycerol-3-phosphate dehydrogenase GO=Molecular Function: glycerol-3-phosphate dehydrogenase (NAD+) activity (GO:0004367), Biological Process: glycerol-3-phosphate metabolic process (GO:0006072), Cellular Component: glycerol-3-phosphate dehydrogenase complex (GO:0009331), Biological Process: oxidation reduction (GO:0055114))
ACD70_40_6
R_Gammaproteobacteria_42_43, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3016..4188
DNA (1173bp) protein (391aa)
hypothetical protein
hypothetical protein
Hypothetical ATPase n=3 Tax=Coxiella burnetii RepID=A9KG59_COXBN (db=UNIREF evalue=1.0e-113 bit_score=413.0 identity=53.83 coverage=96.4194373401535)
seg (db=Seg db_id=seg from=210 to=221)
ACD70_40_7

Not on your lists

4287..4382
DNA (96bp) protein (32aa)
4287..4382 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD45217.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 7 items

View Taxonomy