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ACD71_19

Alias: ACD71_890.20439.21

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD71_19_1

Not on your lists

comp(896..1525)
DNA (630bp) protein (210aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=162 to=184)
transmembrane_regions (db=TMHMM db_id=tmhmm from=130 to=152)
Uncharacterized protein {ECO:0000313|EMBL:EKD44142.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_2

Not on your lists

comp(1568..2041)
DNA (474bp) protein (158aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
seg (db=Seg db_id=seg from=16 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD44143.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_3

Not on your lists

comp(2196..2366)
DNA (171bp) protein (57aa)
seg (db=Seg db_id=seg from=5 to=25)
Uncharacterized protein {ECO:0000313|EMBL:EKD44144.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_4

Not on your lists

2463..4190
DNA (1728bp) protein (576aa)
Lipase family protein n=1 Tax=Helicobacter pullorum MIT 98-5489 RepID=C5F054_9HELI (db=UNIREF evalue=7.0e-10 bit_score=69.7 identity=41.04 coverage=19.6180555555556)
hypothetical protein (db=KEGG evalue=2.0e-09 bit_score=67.8 identity=40.17 coverage=18.5763888888889)
seg (db=Seg db_id=seg from=541 to=560)
seg (db=Seg db_id=seg from=145 to=156)
ACD71_19_5

Not on your lists

4215..5045
DNA (831bp) protein (277aa)
seg (db=Seg db_id=seg from=198 to=212)
Uncharacterized protein {ECO:0000313|EMBL:EKD44146.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_6

Not on your lists

5171..6367
DNA (1197bp) protein (399aa)
5171..6367 + (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44147.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_7

Not on your lists

6412..7029
DNA (618bp) protein (206aa)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=1 to=185 evalue=1.3e-20)
no description (db=Gene3D db_id=G3DSA:3.60.21.10 from=1 to=196 evalue=1.5e-10)
Uncharacterized protein {ECO:0000313|EMBL:EKD44148.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_8

Not on your lists

7074..7421
DNA (348bp) protein (116aa)
7074..7421 + (rbs_motif=TAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44149.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_9

Not on your lists

comp(7404..7736)
DNA (333bp) protein (111aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD44150.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Uncharacterized protein n=1 Tax=Prevotella tannerae ATCC 51259 RepID=C9LHI8_9BACT
ACD71_19_10

Not on your lists

comp(7730..8848)
DNA (1119bp) protein (373aa)
ThiF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F6N4_ACIC5 (db=UNIREF evalue=2.0e-59 bit_score=233.0 identity=33.61 coverage=92.7613941018767)
hypothetical protein
Activating enzymes of the ubiquitin-like proteins (db=superfamily db_id=SSF69572 from=171 to=306 evalue=6.0e-18 interpro_id=IPR009036 interpro_description=Molybdenum cofactor biosynthesis, MoeB)
ThiF (db=HMMPfam db_id=PF00899 from=173 to=292 evalue=2.3e-15 interpro_id=IPR000594 interpro_description=UBA/THIF-type NAD/FAD binding fold GO=Molecular Function: catalytic activity (GO:0003824))
ACD71_19_11

Not on your lists

comp(8860..9105)
DNA (246bp) protein (82aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD44152.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ERC4_RUNSL
ACD71_19_12

Not on your lists

9303..9902
DNA (600bp) protein (200aa)
LexA repressor n=1 Tax=Thermotoga lettingae TMO RepID=LEXA_THELT (db=UNIREF evalue=9.0e-25 bit_score=116.0 identity=33.0 coverage=99.0)
SOS regulatory protein LexA
lexA: repressor LexA (db=HMMTigr db_id=TIGR00498 from=2 to=199 evalue=1.5e-24 interpro_id=IPR006200 interpro_description=Peptidase S24, LexA repressor GO=Molecular Function: serine-type endopeptidase activity (GO:0004252), Biological Process: proteolysis (GO:0006508))
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=71 to=198 evalue=4.1e-16 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
ACD71_19_13

Not on your lists

comp(9980..10291)
DNA (312bp) protein (104aa)
9980..10291 - (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44154.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_14

Not on your lists

10471..11142
DNA (672bp) protein (224aa)
10471..11142 + (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44155.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_15

Not on your lists

comp(11162..11755)
DNA (594bp) protein (198aa)
mobile mystery protein B
mob_myst_B: mobile mystery protein B (db=HMMTigr db_id=TIGR02613 from=11 to=194 evalue=1.1e-82 interpro_id=IPR013436 interpro_description=Mobile mystery protein B)
Fic-like (db=superfamily db_id=SSF140931 from=33 to=192 evalue=1.1e-31)
Fic (db=HMMPfam db_id=PF02661 from=56 to=146 evalue=2.0e-15 interpro_id=IPR003812 interpro_description=Filamentation induced by cAMP/death on curing, related)
ACD71_19_16

Not on your lists

comp(11746..12201)
DNA (456bp) protein (152aa)
Mobile mystery protein A n=1 Tax=Verminephrobacter eiseniae EF01-2 RepID=A1WDU1_VEREI (db=UNIREF evalue=1.0e-15 bit_score=85.5 identity=32.9 coverage=98.0263157894737)
transcriptional regulator, XRE family protein
Mobile mystery protein A {ECO:0000313|EMBL:EKD44157.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_17

Not on your lists

12856..13395
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DIQ0_9EURY (db=UNIREF evalue=2.0e-22 bit_score=108.0 identity=37.64 coverage=98.3333333333333)
hypothetical protein
seg (db=Seg db_id=seg from=12 to=23)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=171 evalue=1.2e-13)
ACD71_19_18

Not on your lists

comp(13397..14131)
DNA (735bp) protein (245aa)
hydrolase HAD superfamily
HAD-like (db=superfamily db_id=SSF56784 from=14 to=236 evalue=3.0e-29)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=18 to=240 evalue=1.4e-11)
Hydrolase (db=HMMPfam db_id=PF00702 from=18 to=198 evalue=2.5e-09 interpro_id=IPR005834 interpro_description=Haloacid dehalogenase-like hydrolase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: metabolic process (GO:0008152))
ACD71_19_19

Not on your lists

comp(14138..15418)
DNA (1281bp) protein (427aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=4 Tax=Methanocaldococcus RepID=METK_METJA (db=UNIREF evalue=1.0e-42 bit_score=177.0 identity=33.08 coverage=86.8852459016393)
AdoMet_Synthase (db=HMMPfam db_id=PF01941 from=22 to=409 evalue=1.6e-54 interpro_id=IPR002795 interpro_description=S-adenosylmethionine synthetase (MAT), archaea GO=Molecular Function: methionine adenosyltransferase activity (GO:0004478), Molecular Function: ATP binding (GO:0005524), Biological Process: one-carbon metabolic process (GO:0006730))
METK_METJA_Q58605; (db=BlastProDom db_id=PD011777 from=24 to=402 evalue=8.0e-44 interpro_id=IPR002795 interpro_description=S-adenosylmethionine synthetase (MAT), archaea GO=Molecular Function: methionine adenosyltransferase activity (GO:0004478), Molecular Function: ATP binding (GO:0005524), Biological Process: one-carbon metabolic process (GO:0006730))
ACD71_19_20

Not on your lists

comp(15461..16861)
DNA (1401bp) protein (467aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
seg (db=Seg db_id=seg from=351 to=364)
seg (db=Seg db_id=seg from=244 to=255)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=26 to=310 evalue=3.5e-31)
ACD71_19_21

Not on your lists

17246..17464
DNA (219bp) protein (73aa)
17246..17464 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD44162.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_22

Not on your lists

17421..17597
DNA (177bp) protein (59aa)
17421..17597 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD44163.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_23

Not on your lists

comp(17631..18248)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KTD3_9BACT (db=UNIREF evalue=8.0e-17 bit_score=90.1 identity=29.65 coverage=93.2038834951456)
Peptidase_S51 (db=HMMPfam db_id=PF03575 from=73 to=203 evalue=1.9e-08 interpro_id=IPR005320 interpro_description=Peptidase S51, dipeptidase E GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
Class I glutamine amidotransferase-like (db=superfamily db_id=SSF52317 from=84 to=171 evalue=8.9e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKD44164.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_24

Not on your lists

18825..19409
DNA (585bp) protein (195aa)
seg (db=Seg db_id=seg from=172 to=185)
Uncharacterized protein {ECO:0000313|EMBL:EKD44165.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_19_25

Not on your lists

19400..20257
DNA (858bp) protein (286aa)
hypothetical protein
seg (db=Seg db_id=seg from=106 to=115)
DUF1814 (db=HMMPfam db_id=PF08843 from=53 to=259 evalue=1.4e-27 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
Uncharacterized protein {ECO:0000313|EMBL:EKD44166.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying 25 items

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