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ACD71_33

Alias: ACD71_9361.9666.26

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD71_33_1

Not on your lists

comp(1..342)
DNA (342bp) protein (114aa)
seg (db=Seg db_id=seg from=23 to=44)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
Uncharacterized protein {ECO:0000313|EMBL:EKD44134.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_33_2

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comp(416..727)
DNA (312bp) protein (104aa)
rplU; 50S ribosomal protein L21
Ribosomal_L21p (db=HMMPfam db_id=PF00829 from=1 to=97 evalue=1.8e-27 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L21p-like (db=superfamily db_id=SSF141091 from=1 to=102 evalue=4.8e-26)
L21: ribosomal protein L21 (db=HMMTigr db_id=TIGR00061 from=2 to=103 evalue=6.6e-21 interpro_id=IPR001787 interpro_description=Ribosomal protein L21 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD71_33_3

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1102..1737
DNA (636bp) protein (212aa)
metal-dependent phosphohydrolase
HD (db=HMMPfam db_id=PF01966 from=42 to=137 evalue=3.0e-06 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
no description (db=HMMSmart db_id=SM00471 from=37 to=151 evalue=2.7e-05 interpro_id=IPR003607 interpro_description=Metal-dependent phosphohydrolase, HD domain GO=Molecular Function: catalytic activity (GO:0003824))
Metal-dependent phosphohydrolase {ECO:0000313|EMBL:EKD44129.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_33_4

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comp(1754..2989)
DNA (1236bp) protein (412aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=361 to=383)
transmembrane_regions (db=TMHMM db_id=tmhmm from=388 to=407)
seg (db=Seg db_id=seg from=23 to=47)
seg (db=Seg db_id=seg from=62 to=78)
ACD71_33_5

Not on your lists

comp(2993..4339)
DNA (1347bp) protein (449aa)
seg (db=Seg db_id=seg from=436 to=448)
seg (db=Seg db_id=seg from=406 to=420)
seg (db=Seg db_id=seg from=325 to=339)
seg (db=Seg db_id=seg from=211 to=225)
ACD71_33_6

Not on your lists

comp(4345..4560)
DNA (216bp) protein (72aa)
seg (db=Seg db_id=seg from=49 to=69)
Uncharacterized protein {ECO:0000313|EMBL:EKD44132.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_33_7

Not on your lists

comp(4564..4875)
DNA (312bp) protein (104aa)
seg (db=Seg db_id=seg from=59 to=70)
seg (db=Seg db_id=seg from=73 to=88)
Uncharacterized protein {ECO:0000313|EMBL:EKD44133.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_33_8

Not on your lists

5326..6678
DNA (1353bp) protein (451aa)
ctpA; carboxy-terminal processing protease CtpA (EC:3.4.21.102)
seg (db=Seg db_id=seg from=8 to=20)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
coiled-coil (db=Coil db_id=coil from=395 to=416 evalue=NA)
ACD71_33_9

Not on your lists

comp(6744..6983)
DNA (240bp) protein (80aa)
6744..6983 - (rbs_motif=TAA rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44125.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_33_10

Not on your lists

comp(7044..7502)
DNA (459bp) protein (153aa)
RUBREDOXIN (db=PatternScan db_id=PS00202 from=31 to=41 evalue=0.0 interpro_id=IPR018527 interpro_description=Rubredoxin, iron-binding site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
Superoxide reductase-like (db=superfamily db_id=SSF49367 from=59 to=150 evalue=2.0e-14 interpro_id=IPR002742 interpro_description=Desulfoferrodoxin, ferrous iron-binding domain GO=Molecular Function: iron ion binding (GO:0005506), Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
Rubredoxin (db=HMMPfam db_id=PF00301 from=3 to=47 evalue=6.6e-13 interpro_id=IPR004039 interpro_description=Rubredoxin-type Fe(Cys)4 protein GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: metal ion binding (GO:0046872))
Rubredoxin-like (db=superfamily db_id=SSF57802 from=1 to=64 evalue=3.3e-12)
ACD71_33_11

Not on your lists

7721..9253
DNA (1533bp) protein (511aa)
metal dependent phosphohydrolase
metal dependent phosphohydrolase
Metal dependent phosphohydrolase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSV3_9BACT (db=UNIREF evalue=1.0e-106 bit_score=390.0 identity=46.08 coverage=79.6477495107632)
seg (db=Seg db_id=seg from=62 to=102)
ACD71_33_12

Not on your lists

9320..9718
DNA (399bp) protein (133aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=31)
seg (db=Seg db_id=seg from=19 to=28)
Displaying 12 items

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