Alias: ACD71_49924.9402.6
name | lists | location/seqs | annotations | notes |
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ACD71_37_1
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(3..1568)
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Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Arcobacter butzleri RM4018 RepID=A8EWL2_ARCB4 (db=UNIREF evalue=6.0e-44 bit_score=182.0 identity=47.93 coverage=39.463601532567)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) (db=superfamily db_id=SSF52255 from=13 to=189 evalue=1.8e-15 interpro_id=IPR000031 interpro_description=1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase GO=Molecular Function: phosphoribosylaminoimidazole carboxylase activity (GO:0004638), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
AIRC (db=HMMPfam db_id=PF00731 from=21 to=179 evalue=3.4e-15 interpro_id=IPR000031 interpro_description=1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase GO=Molecular Function: phosphoribosylaminoimidazole carboxylase activity (GO:0004638), Biological Process: 'de novo' IMP biosynthetic process (GO:0006189))
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ACD71_37_2
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(1811..2389)
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1811..2389 - (rbs_motif=TAA rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44393.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
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ACD71_37_3
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(3092..3514)
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coiled-coil (db=Coil db_id=coil from=30 to=51 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD44384.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
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ACD71_37_4
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(3520..3918)
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coiled-coil (db=Coil db_id=coil from=96 to=124 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD44385.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
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ACD71_37_5
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
3999..4184
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3999..4184 + (rbs_motif=TAA rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44386.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
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ACD71_37_6
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
4257..5597
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hypothetical protein
alpha/beta-Hydrolases (db=superfamily db_id=SSF53474 from=211 to=384 evalue=9.5e-16)
SLH (db=HMMPfam db_id=PF00395 from=80 to=117 evalue=8.7e-10 interpro_id=IPR001119 interpro_description=S-layer homology domain)
no description (db=Gene3D db_id=G3DSA:3.40.50.1820 from=212 to=369 evalue=3.6e-09)
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ACD71_37_7
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
5720..6292
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ribosomal small subunit pseudouridine synthase A (EC:4.2.1.70)
TIGR00093: pseudouridine synthase (db=HMMTigr db_id=TIGR00093 from=13 to=179 evalue=1.1e-35 interpro_id=IPR000748 interpro_description=Pseudouridine synthase, RsuA/RluB/E/F GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866))
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=7 to=189 evalue=2.1e-27 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982))
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=7 to=187 evalue=9.3e-27)
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ACD71_37_8
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(6570..6677)
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6570..6677 - (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44389.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
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ACD71_37_9
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(6749..8980)
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seg (db=Seg db_id=seg from=542 to=559)
seg (db=Seg db_id=seg from=454 to=468)
transmembrane_regions (db=TMHMM db_id=tmhmm from=245 to=267)
transmembrane_regions (db=TMHMM db_id=tmhmm from=142 to=164)
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ACD71_37_10
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
9308..9436
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9308..9436 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD44391.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
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