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ACD71_43

Alias: ACD71_125433.8376.7

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD71_43_1

Not on your lists

comp(1..96)
DNA (96bp) protein (32aa)
1..96 - (rbs_motif=TAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44754.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_43_2

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comp(422..1672)
DNA (1251bp) protein (417aa)
seg (db=Seg db_id=seg from=7 to=17)
seg (db=Seg db_id=seg from=240 to=251)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=20 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD44755.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_43_3

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comp(1722..3473)
DNA (1752bp) protein (584aa)
hypothetical protein
seg (db=Seg db_id=seg from=101 to=114)
seg (db=Seg db_id=seg from=129 to=152)
PR-1-like (db=superfamily db_id=SSF55797 from=175 to=263 evalue=6.5e-06 interpro_id=IPR014044 interpro_description=SCP-like extracellular)
ACD71_43_4

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3521..3643
DNA (123bp) protein (41aa)
3521..3643 + (rbs_motif=TAA rbs_spacer=5bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD44757.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_43_5

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3818..4066
DNA (249bp) protein (83aa)
seg (db=Seg db_id=seg from=12 to=21)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=79 evalue=1.8e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_3 (db=HMMPfam db_id=PF01381 from=13 to=67 evalue=1.2e-11 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=9 to=70 evalue=2.3e-11)
ACD71_43_6

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4100..4531
DNA (432bp) protein (144aa)
DNA recombinase
Resolvase (db=HMMPfam db_id=PF00239 from=6 to=130 evalue=2.0e-19 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Resolvase-like (db=superfamily db_id=SSF53041 from=4 to=130 evalue=2.1e-18 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
no description (db=HMMSmart db_id=SM00857 from=6 to=143 evalue=2.1e-17 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
ACD71_43_7

Not on your lists

4670..4873
DNA (204bp) protein (68aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=43 to=65)
Uncharacterized protein {ECO:0000313|EMBL:EKD44760.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_43_8
ACD49, Gracilibacteria, Bacteria

Not on your lists

4893..6446
DNA (1554bp) protein (518aa)
resolvase domain-containing protein
seg (db=Seg db_id=seg from=487 to=497)
no description (db=HMMSmart db_id=SM00857 from=17 to=173 evalue=3.4e-37 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
Resolvase-like (db=superfamily db_id=SSF53041 from=15 to=174 evalue=8.6e-29 interpro_id=IPR006119 interpro_description=Resolvase, N-terminal GO=Molecular Function: recombinase activity (GO:0000150), Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310))
ACD71_43_9

Not on your lists

6563..7969
DNA (1407bp) protein (469aa)
seg (db=Seg db_id=seg from=438 to=445)
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=42 to=200 evalue=8.7e-06)
Uncharacterized protein {ECO:0000313|EMBL:EKD44752.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_43_10

Not on your lists

8164..8409
DNA (246bp) protein (82aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD44753.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
Displaying 10 items

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