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ACD71_78

Alias: ACD71_2672.3092.26

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD71_78_1

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comp(3..965)
DNA (963bp) protein (321aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=27 to=38)
seg (db=Seg db_id=seg from=176 to=192)
seg (db=Seg db_id=seg from=98 to=121)
ACD71_78_2

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comp(993..1286)
DNA (294bp) protein (98aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=85 to=97)
Uncharacterized protein {ECO:0000313|EMBL:EKD44601.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
ACD71_78_3

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1398..2018
DNA (621bp) protein (207aa)
seg (db=Seg db_id=seg from=70 to=88)
seg (db=Seg db_id=seg from=28 to=45)
transmembrane_regions (db=TMHMM db_id=tmhmm from=138 to=160)
transmembrane_regions (db=TMHMM db_id=tmhmm from=109 to=128)
ACD71_78_4

Not on your lists

2120..3136
DNA (1017bp) protein (339aa)
hypothetical protein
Sigma70_r4 (db=HMMPfam db_id=PF04545 from=18 to=67 evalue=3.3e-12 interpro_id=IPR007630 interpro_description=RNA polymerase sigma-70 region 4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
Sigma3 and sigma4 domains of RNA polymerase sigma factors (db=superfamily db_id=SSF88659 from=16 to=82 evalue=7.6e-12 interpro_id=IPR013324 interpro_description=RNA polymerase sigma factor, region 3/4 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987))
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=3 to=88 evalue=1.2e-11 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
Displaying 4 items

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