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ACD72_11

Alias: ACD72_1674.5038.7

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD72_11_1

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comp(3..170)
DNA (168bp) protein (56aa)
3..170 - (rbs_motif=TAAT rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD43847.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_11_2

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277..858
DNA (582bp) protein (194aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit (db=HMMPIR db_id=PIRSF000498 from=1 to=193 evalue=4.6e-63 interpro_id=IPR001783 interpro_description=Lumazine-binding protein)
RIBOFLAVIN SYNTHASE ALPHA CHAIN (db=HMMPanther db_id=PTHR21098 from=1 to=191 evalue=7.8e-60 interpro_id=IPR001783 interpro_description=Lumazine-binding protein)
ribE: riboflavin synthase, alpha subunit (db=HMMTigr db_id=TIGR00187 from=1 to=193 evalue=1.3e-50 interpro_id=IPR001783 interpro_description=Lumazine-binding protein)
ACD72_11_3

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860..1306
DNA (447bp) protein (149aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase
DMRL_synthase (db=HMMPfam db_id=PF00885 from=5 to=148 evalue=4.6e-44 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
Lumazine synthase (db=superfamily db_id=SSF52121 from=5 to=148 evalue=4.9e-41 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
no description (db=Gene3D db_id=G3DSA:3.40.50.960 from=1 to=148 evalue=2.5e-40 interpro_id=IPR002180 interpro_description=6,7-dimethyl-8-ribityllumazine synthase GO=Biological Process: riboflavin biosynthetic process (GO:0009231), Cellular Component: riboflavin synthase complex (GO:0009349))
ACD72_11_4

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1303..1908
DNA (606bp) protein (202aa)
3,4-dihydroxy-2-butanone-4-phosphate synthase n=1 Tax=Lactobacillus ultunensis DSM 16047 RepID=C2EN88_9LACO (db=UNIREF evalue=7.0e-55 bit_score=216.0 identity=58.92 coverage=88.6138613861386)
GTP cyclohydrolase II
ribA: GTP cyclohydrolase II (db=HMMTigr db_id=TIGR00505 from=9 to=198 evalue=1.5e-74 interpro_id=IPR000926 interpro_description=GTP cyclohydrolase II GO=Molecular Function: GTP cyclohydrolase II activity (GO:0003935), Biological Process: riboflavin biosynthetic process (GO:0009231))
GTP CYCLOHYDROLASE II (db=HMMPanther db_id=PTHR21327:SF1 from=11 to=165 evalue=7.3e-68)
ACD72_11_5

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1910..3004
DNA (1095bp) protein (365aa)
2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase
Riboflavin biosynthesis protein RibD n=1 Tax=Alkaliphilus metalliredigens QYMF RepID=A6TM17_ALKMQ (db=UNIREF evalue=6.0e-90 bit_score=334.0 identity=45.94 coverage=95.6164383561644)
CYT_DCMP_DEAMINASES (db=PatternScan db_id=PS00903 from=57 to=95 evalue=0.0 interpro_id=IPR016192 interpro_description=APOBEC/CMP deaminase, zinc-binding GO=Molecular Function: zinc ion binding (GO:0008270), Molecular Function: hydrolase activity (GO:0016787))
eubact_ribD: riboflavin biosynthesis prot (db=HMMTigr db_id=TIGR00326 from=14 to=360 evalue=9.7e-121 interpro_id=IPR004794 interpro_description=Riboflavin biosynthesis protein RibD GO=Molecular Function: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity (GO:0008703), Molecular Function: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity (GO:0008835), Biological Process: riboflavin biosynthetic process (GO:0009231), Biological Process: oxidation reduction (GO:0055114))
ACD72_11_6

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comp(3001..3972)
DNA (972bp) protein (324aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Chlorobium limicola DSM 245 RepID=B3EC85_CHLL2 (db=UNIREF evalue=2.0e-10 bit_score=70.5 identity=35.44 coverage=46.6049382716049)
transmembrane_regions (db=TMHMM db_id=tmhmm from=164 to=186)
transmembrane_regions (db=TMHMM db_id=tmhmm from=129 to=151)
ACD72_11_7

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comp(4034..4375)
DNA (342bp) protein (114aa)
hypothetical protein
T4 endonuclease V (db=superfamily db_id=SSF47077 from=1 to=73 evalue=5.7e-22 interpro_id=IPR021143 interpro_description=Pyrimidine dimer DNA glycosylase, endonuclease V type)
Pyr_excise (db=HMMPfam db_id=PF03013 from=1 to=75 evalue=1.1e-12 interpro_id=IPR004260 interpro_description=Pyrimidine dimer DNA glycosylase)
no description (db=Gene3D db_id=G3DSA:1.10.440.10 from=1 to=72 evalue=3.7e-05 interpro_id=IPR021143 interpro_description=Pyrimidine dimer DNA glycosylase, endonuclease V type)
ACD72_11_8

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comp(4378..4776)
DNA (399bp) protein (133aa)
TspO and MBR-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=108 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=79 to=101)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
ACD72_11_9

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comp(4835..5071)
DNA (237bp) protein (79aa)
Transporter
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
DUF318 (db=HMMPfam db_id=PF03773 from=1 to=75 evalue=3.8e-15 interpro_id=IPR005524 interpro_description=Protein of unknown function DUF318, transmembrane)
Displaying 9 items

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