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ACD72_19

Alias: ACD72_223512.8780.7

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD72_19_1

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comp(69..167)
DNA (99bp) protein (33aa)
69..167 - (rbs_motif=TAA rbs_spacer=11bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD43702.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_19_2

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407..1585
DNA (1179bp) protein (393aa)
ferrous iron transport protein B
seg (db=Seg db_id=seg from=63 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=364 to=386)
transmembrane_regions (db=TMHMM db_id=tmhmm from=332 to=354)
ACD72_19_3

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1587..1739
DNA (153bp) protein (51aa)
seg (db=Seg db_id=seg from=3 to=22)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD43693.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_19_4

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1751..2806
DNA (1056bp) protein (352aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W565_UNCMA (db=UNIREF evalue=1.0e-72 bit_score=277.0 identity=45.51 coverage=90.625)
seg (db=Seg db_id=seg from=2 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=146 to=168)
ACD72_19_5

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2829..3947
DNA (1119bp) protein (373aa)
YibE/F-like protein
seg (db=Seg db_id=seg from=244 to=258)
seg (db=Seg db_id=seg from=142 to=164)
seg (db=Seg db_id=seg from=125 to=135)
ACD72_19_6
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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3997..4917
DNA (921bp) protein (307aa)
integral membrane protein terc
seg (db=Seg db_id=seg from=271 to=290)
seg (db=Seg db_id=seg from=179 to=192)
transmembrane_regions (db=TMHMM db_id=tmhmm from=281 to=303)
ACD72_19_7

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4924..5361
DNA (438bp) protein (146aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=85)
seg (db=Seg db_id=seg from=68 to=89)
Uncharacterized protein {ECO:0000313|EMBL:EKD43697.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_19_8
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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5378..6697
DNA (1320bp) protein (440aa)
hypothetical protein
seg (db=Seg db_id=seg from=116 to=136)
seg (db=Seg db_id=seg from=59 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=416 to=438)
ACD72_19_9
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(6780..7277)
DNA (498bp) protein (166aa)
transcription elongation factor GreA
GREAB_2 (db=PatternScan db_id=PS00830 from=130 to=146 evalue=0.0 interpro_id=IPR018151 interpro_description=Transcription elongation factor, GreA/GreB, conserved site GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
GreA_GreB (db=HMMPfam db_id=PF01272 from=93 to=165 evalue=1.2e-19 interpro_id=IPR001437 interpro_description=Transcription elongation factor, GreA/GreB, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription elongation regulator activity (GO:0003711), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
FKBP-like (db=superfamily db_id=SSF54534 from=91 to=164 evalue=1.7e-15)
ACD72_19_10
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(7288..7545)
DNA (258bp) protein (86aa)
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein
4Fe-4S ferredoxins (db=superfamily db_id=SSF54862 from=3 to=77 evalue=1.6e-06)
no description (db=Gene3D db_id=G3DSA:3.30.70.20 from=3 to=77 evalue=0.001)
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
ACD72_19_11

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comp(7547..8782)
DNA (1236bp) protein (412aa)
peptidase U32
seg (db=Seg db_id=seg from=342 to=354)
seg (db=Seg db_id=seg from=146 to=156)
PEPTIDASE_U32 (db=PatternScan db_id=PS01276 from=170 to=188 evalue=0.0 interpro_id=IPR001539 interpro_description=Peptidase U32 GO=Biological Process: proteolysis (GO:0006508), Molecular Function: peptidase activity (GO:0008233))
Displaying 11 items

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