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ACD72_57

Alias: ACD72_168270.5679.7

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD72_57_1

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comp(61..765)
DNA (705bp) protein (235aa)
hypothetical protein
seg (db=Seg db_id=seg from=134 to=146)
seg (db=Seg db_id=seg from=60 to=72)
CSA_PPIASE_1 (db=PatternScan db_id=PS00170 from=118 to=135 evalue=0.0 interpro_id=IPR020892 interpro_description=Peptidyl-prolyl cis-trans isomerase, cyclophilin-type, conserved site GO=Molecular Function: peptidyl-prolyl cis-trans isomerase activity (GO:0003755), Biological Process: protein folding (GO:0006457))
ACD72_57_2

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comp(776..1330)
DNA (555bp) protein (185aa)
hypothetical protein
seg (db=Seg db_id=seg from=16 to=30)
DUF45 (db=HMMPfam db_id=PF01863 from=85 to=182 evalue=3.3e-36 interpro_id=IPR002725 interpro_description=Protein of unknown function DUF45)
Uncharacterized protein {ECO:0000313|EMBL:EKD43831.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_57_3

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comp(1350..2240)
DNA (891bp) protein (297aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=276 to=295)
seg (db=Seg db_id=seg from=120 to=145)
seg (db=Seg db_id=seg from=210 to=220)
seg (db=Seg db_id=seg from=248 to=259)
ACD72_57_4

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2361..2672
DNA (312bp) protein (104aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
seg (db=Seg db_id=seg from=28 to=37)
seg (db=Seg db_id=seg from=47 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKD43833.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_57_5

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comp(2727..4586)
DNA (1860bp) protein (620aa)
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ
ATP-dependent DNA helicase RecQ n=1 Tax=Moritella sp. PE36 RepID=A6F913_9GAMM (db=UNIREF evalue=2.0e-171 bit_score=606.0 identity=48.33 coverage=95.4838709677419)
recQ: ATP-dependent DNA helicase RecQ (db=HMMTigr db_id=TIGR01389 from=6 to=593 evalue=6.4e-292 interpro_id=IPR006293 interpro_description=DNA helicase, ATP-dependent, RecQ type, bacterial GO=Molecular Function: ATP-dependent DNA helicase activity (GO:0004003), Biological Process: DNA recombination (GO:0006310), Biological Process: SOS response (GO:0009432))
ACD72_57_6

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comp(4764..5024)
DNA (261bp) protein (87aa)
4764..5024 - (rbs_motif=TAA rbs_spacer=8bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD43835.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD72_57_7

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comp(4984..5187)
DNA (204bp) protein (68aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki F' RepID=B8DL09_DESVM (db=UNIREF evalue=7.0e-17 bit_score=89.4 identity=63.08 coverage=94.1176470588235)
Uncharacterized protein {ECO:0000313|EMBL:EKD43836.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_57_8

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comp(5220..5384)
DNA (165bp) protein (55aa)
5220..5384 - (rbs_motif=TAAT rbs_spacer=13bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD43837.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_57_9

Not on your lists

5468..5713
DNA (246bp) protein (82aa)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=1 to=80 evalue=1.9e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_3 (db=HMMPfam db_id=PF01381 from=13 to=66 evalue=6.7e-13 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=9 to=72 evalue=6.5e-11)
no description (db=HMMSmart db_id=SM00530 from=12 to=68 evalue=9.8e-10 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
Displaying 9 items

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