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ACD72_123

Alias: ACD72_169185.7971.6

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD72_123_1

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comp(3..185)
DNA (183bp) protein (61aa)
hypothetical protein
Cupin 2 protein {ECO:0000313|EMBL:EKD43826.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=gwf1_scaffold_29_79 id=5101721 tax=WS6_GWF1_36_7 species=Methanoculleus bourgensis genus=Methanoculleus taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota organism_desc=RuBisCO project
ACD72_123_2

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comp(291..2192)
DNA (1902bp) protein (634aa)
seg (db=Seg db_id=seg from=374 to=391)
seg (db=Seg db_id=seg from=276 to=294)
seg (db=Seg db_id=seg from=157 to=176)
seg (db=Seg db_id=seg from=8 to=22)
ACD72_123_3

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2281..2892
DNA (612bp) protein (204aa)
hypothetical protein
seg (db=Seg db_id=seg from=86 to=105)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=40)
seg (db=Seg db_id=seg from=69 to=79)
ACD72_123_4

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2895..3647
DNA (753bp) protein (251aa)
thiamine biosynthesis lipoprotein
ApbE-like (db=superfamily db_id=SSF143631 from=1 to=250 evalue=2.1e-49)
ApbE (db=HMMPfam db_id=PF02424 from=92 to=231 evalue=1.3e-28 interpro_id=IPR003374 interpro_description=ApbE-like lipoprotein GO=Biological Process: thiamin biosynthetic process (GO:0009228))
ApbE (db=HMMPfam db_id=PF02424 from=33 to=88 evalue=2.1e-06 interpro_id=IPR003374 interpro_description=ApbE-like lipoprotein GO=Biological Process: thiamin biosynthetic process (GO:0009228))
ACD72_123_5
CG_Magasa_02, Magasanikbacteria, Parcubacteria, Bacteria

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3649..4539
DNA (891bp) protein (297aa)
hypothetical protein
Mll6619 protein n=1 Tax=Mesorhizobium loti RepID=Q988S3_RHILO (db=UNIREF evalue=1.0e-53 bit_score=213.0 identity=47.55 coverage=87.8787878787879)
seg (db=Seg db_id=seg from=281 to=294)
seg (db=Seg db_id=seg from=266 to=277)
ACD72_123_6

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4736..5215
DNA (480bp) protein (160aa)
hypothetical protein
Ferredoxin reductase-like, C-terminal NADP-linked domain (db=superfamily db_id=SSF52343 from=9 to=153 evalue=2.1e-31)
no description (db=Gene3D db_id=G3DSA:3.40.50.80 from=7 to=151 evalue=2.8e-25)
NAD_binding_1 (db=HMMPfam db_id=PF00175 from=31 to=134 evalue=4.1e-16 interpro_id=IPR001433 interpro_description=Oxidoreductase FAD/NAD(P)-binding GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation reduction (GO:0055114))
No CxxCH domain (see full annotation) Jill Banfield (11/16/12)
ACD72_123_7

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comp(5227..6552)
DNA (1326bp) protein (442aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=31)
seg (db=Seg db_id=seg from=98 to=117)
seg (db=Seg db_id=seg from=393 to=403)
coiled-coil (db=Coil db_id=coil from=35 to=91 evalue=NA)
ACD72_123_8

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comp(6627..6752)
DNA (126bp) protein (42aa)
6627..6752 - (rbs_motif=TAAT rbs_spacer=9bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD43824.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_123_9

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7049..8005
DNA (957bp) protein (319aa)
YgjD/Kae1/Qri7 family protein
bact_gcp: putative glycoprotease GCP (db=HMMTigr db_id=TIGR03723 from=3 to=317 evalue=3.3e-171 interpro_id=IPR022450 interpro_description=Peptidase M22, O-sialoglycoprotein peptidase)
gcp_kae1: metallohydrolase, glycoprotease/Ka (db=HMMTigr db_id=TIGR00329 from=4 to=309 evalue=2.6e-134 interpro_id=IPR017861 interpro_description=Peptidase M22, glycoprotease, subgroup GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
Peptidase_M22 (db=HMMPfam db_id=PF00814 from=27 to=309 evalue=1.1e-95 interpro_id=IPR000905 interpro_description=Peptidase M22, glycoprotease GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
Displaying 9 items

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