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ACD72_145

Alias: ACD72_8020.4172.8

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD72_145_1

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1..534
DNA (534bp) protein (178aa)
2-amino-3-ketobutyrate coenzyme A ligase n=4 Tax=Shewanella RepID=Q07W51_SHEFN (db=UNIREF evalue=3.0e-52 bit_score=207.0 identity=54.55 coverage=98.314606741573)
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
2-AMINO-3-KETOBUTYRATE COENZYME A LIGASE (db=HMMPanther db_id=PTHR13693:SF14 from=1 to=175 evalue=4.1e-77 interpro_id=IPR011282 interpro_description=2-amino-3-ketobutyrate coenzyme A ligase GO=Molecular Function: glycine C-acetyltransferase activity (GO:0008890))
CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE (db=HMMPanther db_id=PTHR13693 from=1 to=175 evalue=4.1e-77)
ACD72_145_2

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659..937
DNA (279bp) protein (93aa)
fdxC; ferredoxin-4
2FE2S_FER_1 (db=PatternScan db_id=PS00197 from=36 to=44 evalue=0.0 interpro_id=IPR006058 interpro_description=2Fe-2S ferredoxin, iron-sulphur binding site GO=Molecular Function: electron carrier activity (GO:0009055))
2Fe-2S ferredoxin-like (db=superfamily db_id=SSF54292 from=1 to=91 evalue=1.4e-18 interpro_id=IPR001041 interpro_description=Ferredoxin GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
Fer2 (db=HMMPfam db_id=PF00111 from=11 to=84 evalue=1.3e-12 interpro_id=IPR001041 interpro_description=Ferredoxin GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD72_145_3

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941..1579
DNA (639bp) protein (213aa)
zinc metalloprotease
transmembrane_regions (db=TMHMM db_id=tmhmm from=187 to=209)
transmembrane_regions (db=TMHMM db_id=tmhmm from=128 to=150)
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
ACD72_145_4

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1597..2310
DNA (714bp) protein (238aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKD42915.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD72_145_5

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2502..2921
DNA (420bp) protein (140aa)
30S ribosomal protein S12
seg (db=Seg db_id=seg from=50 to=60)
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=58 to=65 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsL_bact: ribosomal protein S12 (db=HMMTigr db_id=TIGR00981 from=1 to=139 evalue=1.9e-82 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
ACD72_145_6

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2947..3420
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=1 Tax=Nitratiruptor sp. SB155-2 RepID=RS7_NITSB (db=UNIREF evalue=9.0e-47 bit_score=188.0 identity=58.97 coverage=96.8354430379747)
rpsG; 30S ribosomal protein S7
rpsG_bact: ribosomal protein S7 (db=HMMTigr db_id=TIGR01029 from=2 to=156 evalue=3.1e-75 interpro_id=IPR005717 interpro_description=Ribosomal protein S7, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Ribosomal_S7 (db=HMMPfam db_id=PF00177 from=4 to=151 evalue=9.9e-56 interpro_id=IPR000235 interpro_description=Ribosomal protein S7 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD72_145_7

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3499..4179
DNA (681bp) protein (227aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=156 to=178)
transmembrane_regions (db=TMHMM db_id=tmhmm from=107 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=81 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
Displaying 7 items

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