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ACD72_170

Alias: ACD72_51484.5936.8

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD72_170_1

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3..512
DNA (510bp) protein (170aa)
nucleoside-diphosphate kinase
Nucleoside diphosphate kinase, NDK (db=superfamily db_id=SSF54919 from=1 to=161 evalue=1.5e-27 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
NDK (db=HMMPfam db_id=PF00334 from=57 to=147 evalue=1.7e-22 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
no description (db=Gene3D db_id=G3DSA:3.30.70.141 from=1 to=163 evalue=2.7e-22 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
ACD72_170_2
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(768..1127)
DNA (360bp) protein (120aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
GLUTAREDOXIN_1 (db=PatternScan db_id=PS00195 from=36 to=52 evalue=0.0 interpro_id=IPR011767 interpro_description=Glutaredoxin active site GO=Molecular Function: electron carrier activity (GO:0009055), Biological Process: cell redox homeostasis (GO:0045454))
Uncharacterized protein Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
cytochrome c biogenesis transmembrane protein
ACD72_170_3
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(1222..1395)
DNA (174bp) protein (58aa)
L28p-like (db=superfamily db_id=SSF143800 from=1 to=55 evalue=1.1e-09)
Ribosomal_L28 (db=HMMPfam db_id=PF00830 from=5 to=55 evalue=1.0e-07 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Uncharacterized protein Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
ACD72_170_4
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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1568..2182
DNA (615bp) protein (205aa)
transmembrane protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=176 to=198)
transmembrane_regions (db=TMHMM db_id=tmhmm from=128 to=150)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
ACD72_170_5

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2185..3384
DNA (1200bp) protein (400aa)
putative Exodeoxyribonuclease 7 large subunit (EC:3.1.11.6)
seg (db=Seg db_id=seg from=99 to=110)
Exonuc_VII_L (db=HMMPfam db_id=PF02601 from=115 to=321 evalue=1.8e-64 interpro_id=IPR020579 interpro_description=Exonuclease VII, large subunit, C-terminal)
xseA: exodeoxyribonuclease VII, large subuni (db=HMMTigr db_id=TIGR00237 from=6 to=385 evalue=5.9e-57 interpro_id=IPR003753 interpro_description=Exonuclease VII, large subunit GO=Biological Process: DNA catabolic process (GO:0006308), Molecular Function: exodeoxyribonuclease VII activity (GO:0008855), Cellular Component: exodeoxyribonuclease VII complex (GO:0009318))
ACD72_170_6
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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3386..3577
DNA (192bp) protein (64aa)
Exonuc_VII_S (db=HMMPfam db_id=PF02609 from=9 to=61 evalue=3.9e-12 interpro_id=IPR003761 interpro_description=Exonuclease VII, small subunit GO=Biological Process: DNA catabolic process (GO:0006308), Molecular Function: exodeoxyribonuclease VII activity (GO:0008855), Cellular Component: exodeoxyribonuclease VII complex (GO:0009318))
XseB-like (db=superfamily db_id=SSF116842 from=5 to=63 evalue=2.0e-09)
Uncharacterized protein Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
ACD72_170_7
unknown

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3584..3676
DNA (93bp) protein (31aa)
3584..3676 + (rbs_motif=TAA rbs_spacer=6bp)
ACD72_170_8
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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3687..4025
DNA (339bp) protein (113aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=110)
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
seg (db=Seg db_id=seg from=2 to=16)
ACD72_170_9

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4033..4728
DNA (696bp) protein (232aa)
uridylate kinase
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
pyrH_arch: putative uridylate kinase (db=HMMTigr db_id=TIGR02076 from=8 to=231 evalue=1.2e-55 interpro_id=IPR011818 interpro_description=Uridylate kinase, archaeal/spirochete, putative GO=Biological Process: pyrimidine nucleotide biosynthetic process (GO:0006221), Molecular Function: uridylate kinase activity (GO:0009041))
no description (db=Gene3D db_id=G3DSA:3.40.1160.10 from=3 to=230 evalue=7.5e-33 interpro_id=IPR001048 interpro_description=Aspartate/glutamate/uridylate kinase GO=Biological Process: cellular amino acid biosynthetic process (GO:0008652))
ACD72_170_10
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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4930..5448
DNA (519bp) protein (173aa)
rplJ; 50S ribosomal protein L10
seg (db=Seg db_id=seg from=150 to=166)
Ribosomal_L10 (db=HMMPfam db_id=PF00466 from=3 to=98 evalue=7.2e-14 interpro_id=IPR001790 interpro_description=Ribosomal protein L10 GO=Cellular Component: intracellular (GO:0005622), Biological Process: ribosome biogenesis (GO:0042254))
Q30KS2_CANFA_Q30KS2; (db=BlastProDom db_id=PD968187 from=79 to=142 evalue=0.001)
ACD72_170_11

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5466..5864
DNA (399bp) protein (133aa)
rplL; 50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 n=1 Tax=uncultured Termite group 1 bacterium phylotype Rs-D17 RepID=RL7_UNCTG (db=UNIREF evalue=2.0e-16 bit_score=88.2 identity=60.44 coverage=67.6691729323308)
seg (db=Seg db_id=seg from=107 to=128)
seg (db=Seg db_id=seg from=42 to=60)
Displaying 11 items

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