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ACD72_184

Alias: ACD72_302008.16798.8

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD72_184_1

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comp(3..455)
DNA (453bp) protein (151aa)
PA-phosphatase-like phosphoesterase
seg (db=Seg db_id=seg from=130 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=32 to=54)
transmembrane_regions (db=TMHMM db_id=tmhmm from=103 to=120)
ACD72_184_2
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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585..1160
DNA (576bp) protein (192aa)
DNA polymerase V subunit n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LXI2_SYNAS (db=UNIREF evalue=5.0e-46 bit_score=187.0 identity=47.06 coverage=96.875)
DNA polymerase V subunit
LexA/Signal peptidase (db=superfamily db_id=SSF51306 from=65 to=188 evalue=2.1e-34 interpro_id=IPR015927 interpro_description=Peptidase S24/S26A/S26B/S26C)
no description (db=Gene3D db_id=G3DSA:2.10.109.10 from=72 to=187 evalue=3.2e-33 interpro_id=IPR011056 interpro_description=Peptidase S24/S26A/S26B/S26C, beta-ribbon domain)
ACD72_184_3

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1157..2470
DNA (1314bp) protein (438aa)
Nucleotidyltransferase/DNA polymerase protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LSC9_SYNAS (db=UNIREF evalue=1.0e-113 bit_score=413.0 identity=46.45 coverage=98.8584474885845)
nucleotidyltransferase/DNA polymerase protein
nucleotidyltransferase/DNA polymerase protein
ACD72_184_4

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comp(2485..3003)
DNA (519bp) protein (173aa)
Sortase Surface protein transpeptidase
seg (db=Seg db_id=seg from=6 to=18)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Sortase (db=HMMPfam db_id=PF04203 from=32 to=170 evalue=2.8e-17 interpro_id=IPR005754 interpro_description=Peptidase C60, sortase A/B)
ACD72_184_5

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comp(3018..3404)
DNA (387bp) protein (129aa)
Cupin 2 barrel domain-containing protein
Cupin 2 conserved barrel domain protein n=1 Tax=Geodermatophilus obscurus DSM 43160 RepID=D2SFS6_GEOOG (db=UNIREF evalue=8.0e-21 bit_score=102.0 identity=53.7 coverage=82.9457364341085)
seg (db=Seg db_id=seg from=115 to=125)
seg (db=Seg db_id=seg from=37 to=49)
ACD72_184_6

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comp(3433..5580)
DNA (2148bp) protein (716aa)
hypothetical protein
hypothetical protein StreC_15959 n=1 Tax=Streptomyces sp. C RepID=UPI0001B57CC7 (db=UNIREF evalue=2.0e-28 bit_score=131.0 identity=56.85 coverage=20.1117318435754)
transmembrane_regions (db=TMHMM db_id=tmhmm from=691 to=713)
seg (db=Seg db_id=seg from=34 to=49)
ACD72_184_7
GWA1_OD1_49_17_curated, Parcubacteria, Bacteria

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comp(5606..5926)
DNA (321bp) protein (107aa)
seg (db=Seg db_id=seg from=87 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=46 to=68)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
hypothetical protein Tax=GWA1_OD1_49_17_curated
ACD72_184_8

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comp(5965..6618)
DNA (654bp) protein (218aa)
Sortase Surface protein transpeptidase
Peptidase C60 sortase A and B n=1 Tax=Thermobaculum terrenum ATCC BAA-798 RepID=D1CEX9_THET1 (db=UNIREF evalue=2.0e-25 bit_score=119.0 identity=47.26 coverage=65.1376146788991)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
seg (db=Seg db_id=seg from=16 to=30)
ACD72_184_9
Parcubacteria bacterium GW2011_GWC1_45_9, Parcubacteria, Bacteria

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comp(6693..7757)
DNA (1065bp) protein (355aa)
signal peptide
Putative uncharacterized protein n=1 Tax=Frankia alni ACN14a RepID=Q0RPE1_FRAAA (db=UNIREF evalue=4.0e-51 bit_score=205.0 identity=60.62 coverage=62.8169014084507)
seg (db=Seg db_id=seg from=234 to=297)
seg (db=Seg db_id=seg from=196 to=208)
ACD72_184_10

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comp(7882..10737)
DNA (2856bp) protein (952aa)
putative histidine kinase
putative histidine kinase
Putative histidine kinase n=1 Tax=Methanocella paludicola SANAE RepID=D1YXS9_METPS (db=UNIREF evalue=9.0e-80 bit_score=302.0 identity=30.24 coverage=67.0168067226891)
seg (db=Seg db_id=seg from=272 to=281)
ACD72_184_11

Not on your lists

10843..11697
DNA (855bp) protein (285aa)
xylanase/chitin deacetylase
seg (db=Seg db_id=seg from=201 to=215)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=83 to=245 evalue=3.9e-37 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD72_184_12

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comp(11909..15295)
DNA (3387bp) protein (1129aa)
no description (db=Gene3D db_id=G3DSA:1.10.260.40 from=4 to=71 evalue=1.2e-14)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=3 to=70 evalue=2.2e-13 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
no description (db=HMMSmart db_id=SM00530 from=7 to=63 evalue=2.4e-11 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
HTH_3 (db=HMMPfam db_id=PF01381 from=8 to=61 evalue=1.3e-10 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD72_184_13

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15698..16765
DNA (1068bp) protein (356aa)
gcp; putative DNA-binding/iron metalloprotein/AP endonuclease
gcp; putative DNA-binding/iron metalloprotein/AP endonuclease
GLYCOPROTEASE (db=PatternScan db_id=PS01016 from=95 to=115 evalue=0.0 interpro_id=IPR017860 interpro_description=Peptidase M22, glycoprotease, conserved site GO=Molecular Function: metalloendopeptidase activity (GO:0004222), Biological Process: proteolysis (GO:0006508))
bact_gcp: putative glycoprotease GCP (db=HMMTigr db_id=TIGR03723 from=3 to=335 evalue=1.8e-167 interpro_id=IPR022450 interpro_description=Peptidase M22, O-sialoglycoprotein peptidase)
Displaying 13 items

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