Alias: ACD72_90438.4598.9
name | lists | location/seqs | annotations | notes |
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ACD72_256_1
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(2..241)
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rplF; 50S ribosomal protein L6
60S/50S RIBOSOMAL PROTEIN L6/L9 (db=HMMPanther db_id=PTHR11655 from=2 to=80 evalue=5.4e-18 interpro_id=IPR000702 interpro_description=Ribosomal protein L6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
50S RIBOSOMAL PROTEIN L6 (db=HMMPanther db_id=PTHR11655:SF6 from=2 to=80 evalue=5.4e-18)
Ribosomal_L6 (db=HMMPfam db_id=PF00347 from=11 to=80 evalue=1.2e-17 interpro_id=IPR020040 interpro_description=Ribosomal protein L6, alpha-beta domain GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
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ACD72_256_2
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(270..659)
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rpsH; 30S ribosomal protein S8
RIBOSOMAL_S8 (db=PatternScan db_id=PS00053 from=99 to=116 evalue=0.0 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S8 (db=HMMPfam db_id=PF00410 from=4 to=129 evalue=1.2e-43 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S8 (db=superfamily db_id=SSF56047 from=1 to=129 evalue=9.6e-42 interpro_id=IPR000630 interpro_description=Ribosomal protein S8 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD72_256_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(698..883)
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30S ribosomal protein S14
RIBOSOMAL_S14 (db=PatternScan db_id=PS00527 from=22 to=45 evalue=0.0 interpro_id=IPR018271 interpro_description=Ribosomal protein S14, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
30S RIBOSOMAL PROTEIN S14 (db=HMMPanther db_id=PTHR19836 from=13 to=61 evalue=7.5e-26 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_S14 (db=HMMPfam db_id=PF00253 from=10 to=60 evalue=5.2e-23 interpro_id=IPR001209 interpro_description=Ribosomal protein S14 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD72_256_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(887..1429)
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50S ribosomal protein L5
RIBOSOMAL_L5 (db=PatternScan db_id=PS00358 from=58 to=74 evalue=0.0 interpro_id=IPR020929 interpro_description=Ribosomal protein L5, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
50S RIBOSOMAL PROTEIN L5 (db=HMMPanther db_id=PTHR11994:SF4 from=1 to=180 evalue=3.4e-72)
60S RIBOSOMAL PROTEIN L11-RELATED (db=HMMPanther db_id=PTHR11994 from=1 to=180 evalue=3.4e-72 interpro_id=IPR002132 interpro_description=Ribosomal protein L5 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD72_256_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(1434..1742)
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50S ribosomal protein L24
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=2 to=100 evalue=1.0e-27 interpro_id=IPR008991 interpro_description=Translation protein SH3-like)
rplX_bact: ribosomal protein L24 (db=HMMTigr db_id=TIGR01079 from=1 to=101 evalue=1.6e-27 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
MITOCHONDRIAL RIBOSOMAL PROTEIN L24 (db=HMMPanther db_id=PTHR12903 from=1 to=102 evalue=1.8e-26 interpro_id=IPR003256 interpro_description=Ribosomal protein L24 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD72_256_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(1826..2197)
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50S ribosomal protein L14
seg (db=Seg db_id=seg from=57 to=63)
rplN_bact: ribosomal protein L14 (db=HMMTigr db_id=TIGR01067 from=1 to=123 evalue=4.1e-72 interpro_id=IPR005745 interpro_description=Ribosomal protein L14, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
50S/60S RIBOSOMAL PROTEIN L14/L23 (db=HMMPanther db_id=PTHR11761 from=1 to=123 evalue=1.3e-61 interpro_id=IPR000218 interpro_description=Ribosomal protein L14b/L23e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD72_256_7
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(2209..2475)
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30S ribosomal protein S17
S17_bact: 30S ribosomal protein S17 (db=HMMTigr db_id=TIGR03635 from=10 to=81 evalue=4.3e-39 interpro_id=IPR019984 interpro_description=Ribosomal protein S17, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER (db=HMMPanther db_id=PTHR10744 from=11 to=85 evalue=3.1e-28 interpro_id=IPR000266 interpro_description=Ribosomal protein S17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
no description (db=Gene3D db_id=G3DSA:2.40.50.140 from=10 to=85 evalue=6.2e-27 interpro_id=IPR012340 interpro_description=Nucleic acid-binding, OB-fold)
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ACD72_256_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(2991..3677)
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rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 n=1 Tax=Moorella thermoacetica ATCC 39073 RepID=RS3_MOOTA (db=UNIREF evalue=2.0e-53 bit_score=212.0 identity=49.54 coverage=92.1397379912664)
rpsC_bact: ribosomal protein S3 (db=HMMTigr db_id=TIGR01009 from=1 to=214 evalue=6.4e-72 interpro_id=IPR005704 interpro_description=Ribosomal protein S3, bacterial GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
30S/40S RIBOSOMAL PROTEIN S3 (db=HMMPanther db_id=PTHR11760 from=91 to=214 evalue=6.3e-45)
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ACD72_256_9
uncultured bacterium, Bacteria
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Not on your lists |
comp(3692..4063)
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50S ribosomal protein L22
rplV_bact: ribosomal protein L22 (db=HMMTigr db_id=TIGR01044 from=7 to=109 evalue=9.7e-46 interpro_id=IPR005727 interpro_description=Ribosomal protein L22, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934))
Ribosomal_L22 (db=HMMPfam db_id=PF00237 from=7 to=111 evalue=5.7e-38 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein L22 (db=superfamily db_id=SSF54843 from=3 to=111 evalue=2.2e-36 interpro_id=IPR001063 interpro_description=Ribosomal protein L22/L17 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
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ACD72_256_10
uncultured bacterium, Bacteria
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Not on your lists |
comp(4094..4429)
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30S ribosomal protein S19
seg (db=Seg db_id=seg from=93 to=111)
RIBOSOMAL_S19 (db=PatternScan db_id=PS00323 from=53 to=77 evalue=0.0 interpro_id=IPR020934 interpro_description=Ribosomal protein S19 conserved site GO=Molecular Function: RNA binding (GO:0003723))
rpsS_bact: ribosomal protein S19 (db=HMMTigr db_id=TIGR01050 from=1 to=92 evalue=2.5e-46 interpro_id=IPR005732 interpro_description=Ribosomal protein S19, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
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ACD72_256_11
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria
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Not on your lists |
comp(4436..4636)
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hypothetical protein
50S RIBOSOMAL PROTEIN L2 (db=HMMPanther db_id=PTHR13691:SF5 from=1 to=66 evalue=4.1e-16 interpro_id=IPR005880 interpro_description=Ribosomal protein L2, bacterial-type GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: large ribosomal subunit (GO:0015934), Molecular Function: transferase activity (GO:0016740))
RIBOSOMAL PROTEIN L2 (db=HMMPanther db_id=PTHR13691 from=1 to=66 evalue=4.1e-16 interpro_id=IPR002171 interpro_description=Ribosomal protein L2 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Translation proteins SH3-like domain (db=superfamily db_id=SSF50104 from=1 to=56 evalue=3.2e-13 interpro_id=IPR008991 interpro_description=Translation protein SH3-like)
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