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ACD74_14

Alias: ACD74_24342.8798.13

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD74_14_1

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3..95
DNA (93bp) protein (31aa)
3..95 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD40952.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_2

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comp(125..346)
DNA (222bp) protein (74aa)
seg (db=Seg db_id=seg from=15 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
Uncharacterized protein {ECO:0000313|EMBL:EKD40953.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_3

Not on your lists

comp(377..907)
DNA (531bp) protein (177aa)
seg (db=Seg db_id=seg from=72 to=78)
Phage_CI_repr (db=HMMPfam db_id=PF07022 from=46 to=106 evalue=7.0e-06 interpro_id=IPR010744 interpro_description=Bacteriophage CI repressor GO=Molecular Function: DNA binding (GO:0003677), Biological Process: negative regulation of transcription (GO:0016481), Molecular Function: transcription repressor activity (GO:0016564))
Uncharacterized protein {ECO:0000313|EMBL:EKD40954.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
CI repressor
ACD74_14_4

Not on your lists

958..1227
DNA (270bp) protein (90aa)
958..1227 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40955.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_5

Not on your lists

1224..1472
DNA (249bp) protein (83aa)
1224..1472 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD40956.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_6

Not on your lists

1469..1669
DNA (201bp) protein (67aa)
seg (db=Seg db_id=seg from=2 to=14)
seg (db=Seg db_id=seg from=48 to=55)
Uncharacterized protein {ECO:0000313|EMBL:EKD40957.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_7

Not on your lists

1840..2148
DNA (309bp) protein (103aa)
1840..2148 + (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40958.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_8

Not on your lists

2218..2355
DNA (138bp) protein (46aa)
seg (db=Seg db_id=seg from=24 to=40)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Uncharacterized protein {ECO:0000313|EMBL:EKD40959.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_9

Not on your lists

2366..2515
DNA (150bp) protein (50aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
Uncharacterized protein {ECO:0000313|EMBL:EKD40960.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_10

Not on your lists

2646..2858
DNA (213bp) protein (71aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD40961.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_11

Not on your lists

2858..2980
DNA (123bp) protein (41aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
seg (db=Seg db_id=seg from=10 to=29)
Uncharacterized protein {ECO:0000313|EMBL:EKD40962.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_12

Not on your lists

3361..4653
DNA (1293bp) protein (431aa)
seg (db=Seg db_id=seg from=7 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=406 to=428)
Uncharacterized protein {ECO:0000313|EMBL:EKD40963.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_13

Not on your lists

4663..4989
DNA (327bp) protein (109aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=72 to=94)
seg (db=Seg db_id=seg from=39 to=63)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
DUF2523 (db=HMMPfam db_id=PF10734 from=25 to=101 evalue=9.0e-10 interpro_id=IPR019670 interpro_description=Protein of unknown function DUF2523)
ACD74_14_14

Not on your lists

4991..5947
DNA (957bp) protein (319aa)
putative phage-related membrane protein; K10954 zona occludens toxin (db=KEGG evalue=1.0e-14 bit_score=84.3 identity=29.69 coverage=63.9498432601881)
seg (db=Seg db_id=seg from=267 to=286)
transmembrane_regions (db=TMHMM db_id=tmhmm from=210 to=232)
Zot (db=HMMPfam db_id=PF05707 from=1 to=192 evalue=3.9e-38 interpro_id=IPR008900 interpro_description=Zonular occludens toxin)
ACD74_14_15

Not on your lists

6093..7262
DNA (1170bp) protein (390aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2143 RepID=A0YFT6_9GAMM (db=UNIREF evalue=2.0e-16 bit_score=90.9 identity=27.38 coverage=64.3589743589744)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=27 evalue=5.0)
Uncharacterized protein {ECO:0000313|EMBL:EKD40950.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_16

Not on your lists

7327..7548
DNA (222bp) protein (74aa)
7327..7548 + (rbs_motif=GGxGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40951.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_14_17

Not on your lists

7889..8107
DNA (219bp) protein (73aa)
hypothetical protein
Phage_AlpA (db=HMMPfam db_id=PF05930 from=10 to=58 evalue=8.1e-21 interpro_id=IPR010260 interpro_description=Prophage CP4-57 regulatory)
Uncharacterized protein {ECO:0000313|EMBL:EKD40948.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=19 Tax=Gammaproteobacteria RepID=Q7MPV0_VIBVY
ACD74_14_18

Not on your lists

comp(8079..8834)
DNA (756bp) protein (252aa)
Phage integrase n=1 Tax=Nitrosospira multiformis ATCC 25196 RepID=Q2Y6Z5_NITMU (db=UNIREF evalue=4.0e-98 bit_score=360.0 identity=70.04 coverage=97.2222222222222)
phage integrase
phage integrase
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=52 to=228 evalue=4.9e-24 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
Displaying 18 items

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