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ACD74_20

Alias: ACD74_49605.50337.13

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD74_20_1

Not on your lists

comp(758..991)
DNA (234bp) protein (78aa)
seg (db=Seg db_id=seg from=4 to=16)
Uncharacterized protein {ECO:0000313|EMBL:EKD40859.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_2

Not on your lists

comp(1064..1723)
DNA (660bp) protein (220aa)
seg (db=Seg db_id=seg from=64 to=75)
Uncharacterized protein {ECO:0000313|EMBL:EKD40860.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_3

Not on your lists

2110..3816
DNA (1707bp) protein (569aa)
Putative phospholipase d/transphosphatidylase protein n=1 Tax=Ralstonia solanacearum RepID=B5SBM6_RALSO (db=UNIREF evalue=9.0e-115 bit_score=417.0 identity=44.61 coverage=91.2126537785589)
superfamily I DNA helicase
superfamily I DNA helicase
DNA2/NAM7 HELICASE FAMILY MEMBER MOV10L1 (db=HMMPanther db_id=PTHR10887:SF6 from=54 to=560 evalue=3.2e-93)
ACD74_20_4

Not on your lists

3836..4327
DNA (492bp) protein (164aa)
Cro/CI family transcriptional regulator n=1 Tax=Arsenophonus nasoniae RepID=D2U0N0_9ENTR (db=UNIREF evalue=6.0e-20 bit_score=99.8 identity=46.02 coverage=67.6829268292683)
XRE family transcriptional regulator
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=63 to=119 evalue=5.4e-09 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
ACD74_20_5

Not on your lists

4321..5661
DNA (1341bp) protein (447aa)
hypothetical protein
hypothetical protein
HipA domain protein n=1 Tax=Opitutaceae bacterium TAV2 RepID=C0A6U6_9BACT (db=UNIREF evalue=2.0e-132 bit_score=476.0 identity=53.2 coverage=96.1968680089485)
HipA_C (db=HMMPfam db_id=PF07804 from=273 to=352 evalue=6.4e-22 interpro_id=IPR012893 interpro_description=HipA-like, C-terminal)
ACD74_20_6

Not on your lists

5729..5950
DNA (222bp) protein (74aa)
seg (db=Seg db_id=seg from=10 to=17)
Uncharacterized protein {ECO:0000313|EMBL:EKD40856.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_7

Not on your lists

comp(6250..9441)
DNA (3192bp) protein (1064aa)
hypothetical protein
hypothetical protein
DNA transfer and F pilus assembly protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LU10_SYNAS (db=UNIREF evalue=3.0e-128 bit_score=463.0 identity=46.05 coverage=46.7105263157895)
transmembrane_regions (db=TMHMM db_id=tmhmm from=55 to=77)
ACD74_20_8

Not on your lists

comp(9497..10678)
DNA (1182bp) protein (394aa)
TraH family protein
seg (db=Seg db_id=seg from=297 to=309)
TraH (db=HMMPfam db_id=PF06122 from=1 to=289 evalue=2.2e-37 interpro_id=IPR010927 interpro_description=Type IV conjugative transfer system protein TraH)
Uncharacterized protein {ECO:0000313|EMBL:EKD40858.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_9

Not on your lists

comp(11027..11980)
DNA (954bp) protein (318aa)
hypothetical protein
Hypothetical exported protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LU01_SYNAS (db=UNIREF evalue=1.0e-67 bit_score=260.0 identity=45.89 coverage=88.9937106918239)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
seg (db=Seg db_id=seg from=61 to=75)
ACD74_20_10

Not on your lists

comp(11943..12476)
DNA (534bp) protein (178aa)
type IV secretory protease
Type IV secretory protease n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AKL1_PELPD (db=UNIREF evalue=5.0e-22 bit_score=107.0 identity=39.87 coverage=84.2696629213483)
transmembrane_regions (db=TMHMM db_id=tmhmm from=28 to=50)
Peptidase_S26 (db=HMMPfam db_id=PF10502 from=51 to=176 evalue=6.6e-16 interpro_id=IPR019533 interpro_description=Peptidase S26, conserved region)
ACD74_20_11

Not on your lists

comp(12451..12828)
DNA (378bp) protein (126aa)
hypothetical protein
Conserved hypothetical membrane protein n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1AKL2_PELPD (db=UNIREF evalue=6.0e-10 bit_score=66.6 identity=39.73 coverage=57.1428571428571)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=58)
seg (db=Seg db_id=seg from=37 to=48)
ACD74_20_12

Not on your lists

comp(12961..13464)
DNA (504bp) protein (168aa)
membrane-bound metal-dependent hydrolase
Membrane-bound metal-dependent hydrolase n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A0R7P4_PELPD (db=UNIREF evalue=2.0e-15 bit_score=84.7 identity=33.76 coverage=91.6666666666667)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=145)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=97)
ACD74_20_13

Not on your lists

comp(13452..14117)
DNA (666bp) protein (222aa)
diguanylate cyclase and metal dependent phosphohydrolase
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=18 to=191 evalue=1.6e-30)
HD (db=HMMPfam db_id=PF01966 from=29 to=150 evalue=9.8e-14 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
no description (db=HMMSmart db_id=SM00471 from=23 to=159 evalue=4.3e-08 interpro_id=IPR003607 interpro_description=Metal-dependent phosphohydrolase, HD domain GO=Molecular Function: catalytic activity (GO:0003824))
ACD74_20_14

Not on your lists

comp(14101..14493)
DNA (393bp) protein (131aa)
14101..14493 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40847.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_15

Not on your lists

comp(14503..15540)
DNA (1038bp) protein (346aa)
type-F conjugative transfer system pilin assembly protein TrbC
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Geobacter lovleyi SZ RepID=B3EB54_GEOLS (db=UNIREF evalue=3.0e-49 bit_score=199.0 identity=33.13 coverage=90.1734104046243)
seg (db=Seg db_id=seg from=117 to=129)
TrbC_Ftype (db=HMMPfam db_id=PF09673 from=183 to=321 evalue=1.1e-25 interpro_id=IPR019106 interpro_description=Type-F conjugative transfer system pilin assembly protein TrbC)
ACD74_20_16

Not on your lists

comp(15551..15754)
DNA (204bp) protein (68aa)
15551..15754 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40849.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_17

Not on your lists

comp(15768..16808)
DNA (1041bp) protein (347aa)
conjugal DNA transfer protein
Conjugal DNA transfer protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LU05_SYNAS (db=UNIREF evalue=3.0e-69 bit_score=265.0 identity=45.28 coverage=89.3371757925072)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=7 to=18)
ACD74_20_18

Not on your lists

comp(16825..17442)
DNA (618bp) protein (206aa)
Conserved hypothetical cytosolic protein n=1 Tax=Geobacter lovleyi SZ RepID=B3EB57_GEOLS (db=UNIREF evalue=8.0e-45 bit_score=183.0 identity=47.03 coverage=87.378640776699)
hypothetical protein
TraW_N (db=HMMPfam db_id=PF12477 from=3 to=27 evalue=3.2e-05)
Uncharacterized protein {ECO:0000313|EMBL:EKD40851.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_19

Not on your lists

comp(17644..18165)
DNA (522bp) protein (174aa)
hypothetical protein
Hypothetical exported protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ7_SYNAS (db=UNIREF evalue=9.0e-47 bit_score=189.0 identity=54.34 coverage=98.8505747126437)
seg (db=Seg db_id=seg from=54 to=65)
Uncharacterized protein {ECO:0000313|EMBL:EKD40852.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_20

Not on your lists

comp(20965..22935)
DNA (1971bp) protein (657aa)
hypothetical protein
seg (db=Seg db_id=seg from=360 to=380)
seg (db=Seg db_id=seg from=227 to=244)
seg (db=Seg db_id=seg from=193 to=201)
ACD74_20_21

Not on your lists

comp(22904..25522)
DNA (2619bp) protein (873aa)
sex pilus assembly protein
sex pilus assembly protein
Sex pilus assembly protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ9_SYNAS (db=UNIREF evalue=0.0 bit_score=876.0 identity=53.1 coverage=94.1580756013746)
seg (db=Seg db_id=seg from=677 to=688)
ACD74_20_22

Not on your lists

comp(25522..26049)
DNA (528bp) protein (176aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
TraV (db=HMMPfam db_id=PF09676 from=20 to=163 evalue=4.2e-14 interpro_id=IPR014118 interpro_description=Type IV secretion system, TraV)
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=25 evalue=5.0)
ACD74_20_23

Not on your lists

comp(26061..27317)
DNA (1257bp) protein (419aa)
pilus assembly protein
Pilus assembly protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTZ2_SYNAS (db=UNIREF evalue=4.0e-59 bit_score=232.0 identity=43.17 coverage=92.1241050119332)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=39)
seg (db=Seg db_id=seg from=315 to=351)
ACD74_20_24

Not on your lists

comp(27314..28282)
DNA (969bp) protein (323aa)
hypothetical protein
seg (db=Seg db_id=seg from=146 to=155)
TraK (db=HMMPfam db_id=PF06586 from=96 to=314 evalue=2.8e-36 interpro_id=IPR010563 interpro_description=TraK)
Uncharacterized protein {ECO:0000313|EMBL:EKD40829.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_25

Not on your lists

comp(28322..28942)
DNA (621bp) protein (207aa)
sex pilus assembly/synthesis protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=19 to=38)
seg (db=Seg db_id=seg from=99 to=109)
TraE (db=HMMPfam db_id=PF05309 from=1 to=182 evalue=1.6e-18)
ACD74_20_26

Not on your lists

comp(28939..29217)
DNA (279bp) protein (93aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=64 to=86)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
TraL (db=HMMPfam db_id=PF07178 from=9 to=80 evalue=4.2e-07 interpro_id=IPR009838 interpro_description=Type IV conjugative transfer system, protein TraL GO=Biological Process: conjugation (GO:0000746), Cellular Component: outer membrane (GO:0019867))
ACD74_20_27

Not on your lists

comp(29234..29548)
DNA (315bp) protein (105aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=50 to=72)
Uncharacterized protein {ECO:0000313|EMBL:EKD40832.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_20_28

Not on your lists

comp(29586..30293)
DNA (708bp) protein (236aa)
protein-disulfide isomerase
Protein-disulfide isomerase n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LTY9_SYNAS (db=UNIREF evalue=3.0e-52 bit_score=208.0 identity=49.03 coverage=85.1694915254237)
seg (db=Seg db_id=seg from=93 to=102)
Thioredoxin-like (db=superfamily db_id=SSF52833 from=90 to=235 evalue=1.1e-24 interpro_id=IPR012336 interpro_description=Thioredoxin-like fold)
ACD74_20_29

Not on your lists

comp(30293..30928)
DNA (636bp) protein (212aa)
OmpA domain-containing protein (db=KEGG evalue=6.0e-11 bit_score=70.5 identity=28.21 coverage=84.9056603773585)
OmpA domain protein, putative n=1 Tax=Geobacter sulfurreducens RepID=Q74B69_GEOSL (db=UNIREF evalue=7.0e-11 bit_score=70.5 identity=28.21 coverage=84.9056603773585)
seg (db=Seg db_id=seg from=7 to=17)
OmpA-like (db=superfamily db_id=SSF103088 from=93 to=203 evalue=3.1e-13 interpro_id=IPR006665 interpro_description=Outer membrane protein, OmpA/MotB, C-terminal GO=Cellular Component: cell outer membrane (GO:0009279))
ACD74_20_30

Not on your lists

comp(31443..31874)
DNA (432bp) protein (144aa)
31443..31874 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40835.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying items 1-30 of 59 in total

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