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ACD74_36

Alias: ACD74_10433.5014.11

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD74_36_1

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comp(1..315)
DNA (315bp) protein (105aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=66 to=88)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
seg (db=Seg db_id=seg from=6 to=24)
seg (db=Seg db_id=seg from=69 to=93)
ACD74_36_2

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comp(626..967)
DNA (342bp) protein (114aa)
Helix-turn-helix motif n=2 Tax=delta proteobacterium MLMS-1 RepID=Q1NNV1_9DELT (db=UNIREF evalue=7.0e-46 bit_score=185.0 identity=88.12 coverage=87.719298245614)
XRE family plasmid maintenance system antidote protein
antidote_HigA: addiction module antidot (db=HMMTigr db_id=TIGR02607 from=9 to=89 evalue=1.4e-38 interpro_id=IPR013430 interpro_description=Addiction module antidote protein, HigA GO=Molecular Function: DNA binding (GO:0003677))
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=9 to=76 evalue=4.3e-12 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
good hit to delta Jill Banfield (11/16/12)
ACD74_36_3

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comp(978..1268)
DNA (291bp) protein (97aa)
plasmid maintenance system killer protein
Plasmid maintenance system killer n=1 Tax=Rhodospirillum rubrum ATCC 11170 RepID=Q2RQM0_RHORT (db=UNIREF evalue=5.0e-41 bit_score=169.0 identity=78.12 coverage=97.9381443298969)
Plasmid_killer (db=HMMPfam db_id=PF05015 from=4 to=96 evalue=4.6e-24 interpro_id=IPR007711 interpro_description=Plasmid maintenance system killer)
RelE-like (db=superfamily db_id=SSF143011 from=1 to=96 evalue=5.2e-13)
good hit to Rhodospirillum Jill Banfield (11/16/12)
ACD74_36_4

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1303..1527
DNA (225bp) protein (75aa)
filamentation induced by cAMP protein fic
Filamentation induced by cAMP protein Fic n=1 Tax=Geobacter lovleyi SZ RepID=B3E7Y0_GEOLS (db=UNIREF evalue=8.0e-14 bit_score=79.3 identity=73.85 coverage=85.3333333333333)
seg (db=Seg db_id=seg from=33 to=43)
gb def: Glr3185 protein (db=HMMPanther db_id=PTHR13504:SF1 from=8 to=71 evalue=0.00036)
ACD74_36_5

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comp(1852..2739)
DNA (888bp) protein (296aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD41110.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6H4L8_9DELT
ACD74_36_6

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3219..3590
DNA (372bp) protein (124aa)
3219..3590 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD41111.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD74_36_7

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comp(3912..4292)
DNA (381bp) protein (127aa)
HicB family protein n=1 Tax=Nitrosococcus halophilus Nc4 RepID=D5C3Q4_NITHN (db=UNIREF evalue=2.0e-26 bit_score=120.0 identity=49.09 coverage=85.0393700787402)
HicB family protein
HicB (db=HMMPfam db_id=PF05534 from=57 to=107 evalue=1.4e-18 interpro_id=IPR008651 interpro_description=HicB)
Ribbon-helix-helix (db=superfamily db_id=SSF47598 from=70 to=122 evalue=6.2e-06 interpro_id=IPR010985 interpro_description=Ribbon-helix-helix GO=Biological Process: regulation of transcription (GO:0045449))
ACD74_36_8

Not on your lists

comp(4289..4546)
DNA (258bp) protein (86aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD41113.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=A8ZLN1_ACAM1
ACD74_36_9

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4956..5051
DNA (96bp) protein (32aa)
YJEF_N (db=ProfileScan db_id=PS51385 from=9 to=32 evalue=12.124 interpro_id=IPR004443 interpro_description=YjeF-related protein, N-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKD41114.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 9 items

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