ggKbase home page

ACD75_26

Alias: ACD75_149.19883.45

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD75_26_1

Not on your lists

comp(43..591)
DNA (549bp) protein (183aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Deltaproteobacteria RepID=C8QVK7_9DELT (db=UNIREF evalue=3.0e-65 bit_score=250.0 identity=66.48 coverage=97.2677595628415)
Uncharacterized protein {ECO:0000313|EMBL:EKD39363.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_2

Not on your lists

comp(921..1049)
DNA (129bp) protein (43aa)
921..1049 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD39364.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_3

Not on your lists

1292..4237
DNA (2946bp) protein (982aa)
Type III restriction protein res subunit n=1 Tax=Desulfotomaculum acetoxidans DSM 771 RepID=C8VVK9_DESAS (db=UNIREF evalue=0.0 bit_score=1348.0 identity=67.39 coverage=97.7596741344196)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=524 to=535)
ACD75_26_4

Not on your lists

4234..4515
DNA (282bp) protein (94aa)
DNA polymerase beta domain-containing protein
Nucleotidyltransferase (db=superfamily db_id=SSF81301 from=1 to=78 evalue=3.0e-17)
NTP_transf_2 (db=HMMPfam db_id=PF01909 from=11 to=78 evalue=1.2e-10 interpro_id=IPR002934 interpro_description=Nucleotidyl transferase domain GO=Molecular Function: nucleotidyltransferase activity (GO:0016779))
DNA polymerase beta protein {ECO:0000313|EMBL:EKD39366.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_5

Not on your lists

5139..5453
DNA (315bp) protein (105aa)
Helix-turn-helix DNA binding protein n=1 Tax=Syntrophus aciditrophicus SB RepID=Q2LRT4_SYNAS (db=UNIREF evalue=2.0e-25 bit_score=117.0 identity=54.0 coverage=94.2857142857143)
hypothetical protein
lambda repressor-like DNA-binding domains (db=superfamily db_id=SSF47413 from=23 to=89 evalue=8.5e-08 interpro_id=IPR010982 interpro_description=Lambda repressor-like, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
HTH_3 (db=HMMPfam db_id=PF01381 from=33 to=62 evalue=9.8e-05 interpro_id=IPR001387 interpro_description=Helix-turn-helix type 3 GO=Molecular Function: sequence-specific DNA binding (GO:0043565))
ACD75_26_6

Not on your lists

comp(5701..7077)
DNA (1377bp) protein (459aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Accumulibacter phosphatis clade IIA str. UW-1 RepID=C7RNY8_ACCPU (db=UNIREF evalue=4.0e-101 bit_score=372.0 identity=44.64 coverage=95.4248366013072)
Uncharacterized protein {ECO:0000313|EMBL:EKD39368.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_7

Not on your lists

comp(7040..7150)
DNA (111bp) protein (37aa)
7040..7150 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD39369.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_8

Not on your lists

7399..7620
DNA (222bp) protein (74aa)
7399..7620 + (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD39370.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_9
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7646..8572)
DNA (927bp) protein (309aa)
Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LS19_DESBD (db=UNIREF evalue=1.0e-118 bit_score=429.0 identity=71.23 coverage=91.9093851132686)
hypothetical protein
hypothetical protein
DUF1814 (db=HMMPfam db_id=PF08843 from=37 to=257 evalue=2.9e-29 interpro_id=IPR014942 interpro_description=Protein of unknown function DUF1814)
ACD75_26_10

Not on your lists

comp(8569..9189)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=1 Tax=Desulfomicrobium baculatum DSM 4028 RepID=C7LS20_DESBD (db=UNIREF evalue=5.0e-86 bit_score=320.0 identity=75.13 coverage=94.6859903381642)
hypothetical protein
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKD39351.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_11

Not on your lists

9423..9617
DNA (195bp) protein (65aa)
9423..9617 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD39352.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_12

Not on your lists

9572..9682
DNA (111bp) protein (37aa)
9572..9682 + (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD39353.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_13

Not on your lists

9978..10457
DNA (480bp) protein (160aa)
9978..10457 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD39354.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_14

Not on your lists

comp(10544..13021)
DNA (2478bp) protein (826aa)
ATPase
ATPase
ATPase associated with various cellular activities, AAA_5 n=1 Tax=Psychrobacter cryohalolentis K5 RepID=Q1QC83_PSYCK (db=UNIREF evalue=0.0 bit_score=971.0 identity=58.57 coverage=97.0944309927361)
seg (db=Seg db_id=seg from=442 to=452)
ACD75_26_15

Not on your lists

comp(13124..14335)
DNA (1212bp) protein (404aa)
integrase family protein
integrase family protein
Phage integrase family protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HYH9_9BACT (db=UNIREF evalue=4.0e-143 bit_score=511.0 identity=61.17 coverage=96.7821782178218)
Phage_integrase (db=HMMPfam db_id=PF00589 from=208 to=371 evalue=6.2e-27 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD75_26_16

Not on your lists

comp(14602..15705)
DNA (1104bp) protein (368aa)
phage integrase
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=181 to=356 evalue=1.3e-27 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
no description (db=Gene3D db_id=G3DSA:1.10.443.10 from=181 to=356 evalue=1.7e-20 interpro_id=IPR013762 interpro_description=Integrase-like, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
Phage_integrase (db=HMMPfam db_id=PF00589 from=191 to=345 evalue=6.0e-19 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD75_26_17

Not on your lists

16981..17583
DNA (603bp) protein (201aa)
HhH-GPD family protein
DNA-glycosylase (db=superfamily db_id=SSF48150 from=30 to=198 evalue=5.9e-39 interpro_id=IPR011257 interpro_description=DNA glycosylase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: DNA repair (GO:0006281))
no description (db=Gene3D db_id=G3DSA:1.10.340.30 from=43 to=151 evalue=4.9e-26)
HhH-GPD (db=HMMPfam db_id=PF00730 from=48 to=174 evalue=1.1e-12 interpro_id=IPR003265 interpro_description=HhH-GPD domain GO=Biological Process: base-excision repair (GO:0006284))
ACD75_26_18

Not on your lists

comp(17756..18058)
DNA (303bp) protein (101aa)
seg (db=Seg db_id=seg from=49 to=58)
ParG (db=HMMPfam db_id=PF09274 from=51 to=98 evalue=5.4e-08 interpro_id=IPR015354 interpro_description=DNA partition complex, ParG)
Ribbon-helix-helix (db=superfamily db_id=SSF47598 from=58 to=98 evalue=1.3e-07 interpro_id=IPR010985 interpro_description=Ribbon-helix-helix GO=Biological Process: regulation of transcription (GO:0045449))
Uncharacterized protein {ECO:0000313|EMBL:EKD39359.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_19

Not on your lists

18219..18533
DNA (315bp) protein (105aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCG8_DESAH (db=UNIREF evalue=2.0e-27 bit_score=124.0 identity=56.18 coverage=83.8095238095238)
Uncharacterized protein {ECO:0000313|EMBL:EKD39360.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_26_20

Not on your lists

comp(18549..19664)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NS50_9DELT (db=UNIREF evalue=4.0e-46 bit_score=189.0 identity=41.22 coverage=62.3655913978495)
glycosyl transferase group 1 family protein
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=299 evalue=3.6e-23)
Glycos_transf_1 (db=HMMPfam db_id=PF00534 from=187 to=338 evalue=2.6e-08 interpro_id=IPR001296 interpro_description=Glycosyl transferase, group 1 GO=Biological Process: biosynthetic process (GO:0009058))
ACD75_26_21

Not on your lists

comp(19645..19821)
DNA (177bp) protein (59aa)
19645..19821 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD39362.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 21 items

View Taxonomy