Alias: ACD75_10337.40183.32
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD75_136_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(3..506)
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yjeF-like protein
YjeF N-terminal domain-like (db=superfamily db_id=SSF64153 from=1 to=164 evalue=1.9e-36 interpro_id=IPR004443 interpro_description=YjeF-related protein, N-terminal)
no description (db=Gene3D db_id=G3DSA:3.40.50.10260 from=1 to=164 evalue=1.2e-31)
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ACD75_136_2
uncultured bacterium, Bacteria
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Not on your lists |
1213..1464
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1213..1464 + (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40441.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD75_136_3
uncultured bacterium, Bacteria
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Not on your lists |
1730..1858
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1730..1858 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD40442.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD75_136_4
uncultured bacterium, Bacteria
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Not on your lists |
comp(2239..2442)
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2239..2442 - (rbs_motif=AGGA rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40443.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD75_136_5
uncultured bacterium, Bacteria
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Not on your lists |
comp(2488..3876)
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metalloendopeptidase-like membrane protein
metalloendopeptidase-like membrane protein
Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AK15_DESPS (db=UNIREF evalue=1.0e-123 bit_score=447.0 identity=51.68 coverage=89.4168466522678)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
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ACD75_136_6
uncultured bacterium, Bacteria
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Not on your lists |
comp(3921..5417)
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cytoplasmic axial filament protein (ribonuclease G)
cytoplasmic axial filament protein (ribonuclease G)
Related to cytoplasmic axial filament protein (Ribonuclease G) n=1 Tax=Desulfotalea psychrophila RepID=Q6AK16_DESPS (db=UNIREF evalue=0.0 bit_score=764.0 identity=77.71 coverage=99.3987975951904)
seg (db=Seg db_id=seg from=348 to=358)
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ACD75_136_7
uncultured bacterium, Bacteria
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Not on your lists |
5560..6666
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hypothetical protein
hypothetical protein
DNA repair photolyase-like protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QWA7_9DELT (db=UNIREF evalue=2.0e-119 bit_score=432.0 identity=57.57 coverage=97.289972899729)
Uncharacterized protein {ECO:0000313|EMBL:EKD40446.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD75_136_8
uncultured bacterium, Bacteria
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Not on your lists |
comp(7515..7934)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=101 to=123)
Uncharacterized protein {ECO:0000313|EMBL:EKD40440.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD75_136_9
uncultured bacterium, Bacteria
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Not on your lists |
8248..8457
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chaperone protein DnaJ
Related to chaperone protein DnaJ n=1 Tax=Desulfotalea psychrophila RepID=Q6ALT1_DESPS (db=UNIREF evalue=8.0e-15 bit_score=82.8 identity=57.97 coverage=97.1428571428571)
DnaJ_C (db=HMMPfam db_id=PF01556 from=2 to=57 evalue=1.3e-11 interpro_id=IPR002939 interpro_description=Chaperone DnaJ, C-terminal GO=Biological Process: protein folding (GO:0006457), Molecular Function: unfolded protein binding (GO:0051082))
HSP40/DnaJ peptide-binding domain (db=superfamily db_id=SSF49493 from=1 to=62 evalue=5.6e-10 interpro_id=IPR008971 interpro_description=HSP40/DnaJ peptide-binding GO=Biological Process: protein folding (GO:0006457), Molecular Function: unfolded protein binding (GO:0051082))
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ACD75_136_10
uncultured bacterium, Bacteria
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Not on your lists |
8589..10394
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ABC-type oligopeptide transport system, periplasmic component
ABC-type oligopeptide transport system, periplasmic component
Extracellular solute-binding protein, family 5 n=1 Tax=delta proteobacterium MLMS-1 RepID=Q1NSI3_9DELT (db=UNIREF evalue=0.0 bit_score=675.0 identity=57.99 coverage=94.8504983388704)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
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ACD75_136_11
uncultured bacterium, Bacteria
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Not on your lists |
10583..10798
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cold shock-like protein
COLD_SHOCK (db=PatternScan db_id=PS00352 from=18 to=37 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site)
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=4 to=71 evalue=1.8e-36 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676))
CSD (db=HMMPfam db_id=PF00313 from=4 to=69 evalue=1.2e-30 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
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ACD75_136_12
uncultured bacterium, Bacteria
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Not on your lists |
11213..11722
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ATPase, YjeE family
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=1 to=154 evalue=1.9e-36)
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ACD75_136_13
uncultured bacterium, Bacteria
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Not on your lists |
11870..13618
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hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6ALU1_DESPS (db=UNIREF evalue=0.0 bit_score=746.0 identity=67.66 coverage=91.9382504288165)
seg (db=Seg db_id=seg from=551 to=564)
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ACD75_136_14
uncultured bacterium, Bacteria
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Not on your lists |
13627..14382
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Sel1 repeat protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=9 to=31)
seg (db=Seg db_id=seg from=156 to=167)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=41 to=236 evalue=7.2e-42 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
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ACD75_136_15
uncultured bacterium, Bacteria
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Not on your lists |
comp(14502..14915)
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seg (db=Seg db_id=seg from=59 to=73)
STAS (db=ProfileScan db_id=PS50801 from=51 to=134 evalue=10.012 interpro_id=IPR002645 interpro_description=Sulphate transporter/antisigma-factor antagonist STAS)
Uncharacterized protein {ECO:0000313|EMBL:EKD40426.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD75_136_16
uncultured bacterium, Bacteria
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Not on your lists |
comp(15160..16278)
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putative chemotaxis response regulator
CheY-like (db=superfamily db_id=SSF52172 from=1 to=136 evalue=2.9e-40 interpro_id=IPR011006 interpro_description=CheY-like)
no description (db=HMMSmart db_id=SM00448 from=4 to=117 evalue=4.6e-40 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
SENSOR HISTIDINE KINASE-RELATED (db=HMMPanther db_id=PTHR23283 from=6 to=125 evalue=6.3e-40)
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ACD75_136_17
uncultured bacterium, Bacteria
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Not on your lists |
comp(16311..18041)
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PAS domain S-box
coiled-coil (db=Coil db_id=coil from=144 to=165 evalue=NA)
coiled-coil (db=Coil db_id=coil from=299 to=320 evalue=NA)
seg (db=Seg db_id=seg from=503 to=516)
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ACD75_136_18
uncultured bacterium, Bacteria
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Not on your lists |
18344..18931
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fructose-2,6-bisphosphatase
coiled-coil (db=Coil db_id=coil from=120 to=141 evalue=NA)
Phosphoglycerate mutase-like (db=superfamily db_id=SSF53254 from=5 to=195 evalue=2.0e-48)
no description (db=Gene3D db_id=G3DSA:3.40.50.1240 from=2 to=185 evalue=1.8e-43)
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ACD75_136_19
uncultured bacterium, Bacteria
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Not on your lists |
18936..19523
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Related to bifunctional cobalamin biosynthesis protein (CobP) n=1 Tax=Desulfotalea psychrophila RepID=Q6ALU3_DESPS (db=UNIREF evalue=2.0e-52 bit_score=208.0 identity=56.42 coverage=90.8163265306122)
bifunctional cobalamin biosynthesis protein (CobP)
Bifunctional cobinamide kinase/cobinamide phosphate guanyltransferase (db=HMMPIR db_id=PIRSF006135 from=1 to=181 evalue=2.4e-54 interpro_id=IPR003203 interpro_description=Cobinamide kinase/cobinamide phosphate guanyltransferase GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: adenosylcobinamide kinase activity (GO:0043752), Molecular Function: adenosylcobinamide-phosphate guanylyltransferase activity (GO:0043753), Biological Process: cofactor biosynthetic process (GO:0051188))
CobU (db=HMMPfam db_id=PF02283 from=5 to=177 evalue=5.6e-53 interpro_id=IPR003203 interpro_description=Cobinamide kinase/cobinamide phosphate guanyltransferase GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: adenosylcobinamide kinase activity (GO:0043752), Molecular Function: adenosylcobinamide-phosphate guanylyltransferase activity (GO:0043753), Biological Process: cofactor biosynthetic process (GO:0051188))
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ACD75_136_20
uncultured bacterium, Bacteria
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Not on your lists |
19520..20587
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nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC:2.4.2.21)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase n=1 Tax=Desulfotalea psychrophila RepID=COBT_DESPS (db=UNIREF evalue=9.0e-135 bit_score=483.0 identity=70.7 coverage=99.438202247191)
seg (db=Seg db_id=seg from=242 to=258)
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ACD75_136_21
uncultured bacterium, Bacteria
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Not on your lists |
20620..21411
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cobalamin synthase (CobS)
Cobalamin synthase n=1 Tax=Desulfotalea psychrophila RepID=Q6ALU5_DESPS (db=UNIREF evalue=4.0e-48 bit_score=194.0 identity=49.19 coverage=91.2878787878788)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
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ACD75_136_22
uncultured bacterium, Bacteria
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Not on your lists |
comp(21374..22012)
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21374..22012 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD40433.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD75_136_23
uncultured bacterium, Bacteria
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Not on your lists |
22245..24065
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L-threonine O-3-phosphate decarboxylase (EC:4.1.1.81 6.3.5.10)
Adenosylcobyric acid synthase (Glutamine-hydrolysing) n=1 Tax=Pelobacter carbinolicus DSM 2380 RepID=Q3A7A0_PELCD (db=UNIREF evalue=0.0 bit_score=686.0 identity=58.2 coverage=99.670510708402)
seg (db=Seg db_id=seg from=174 to=182)
cobQ: cobyric acid synthase CobQ (db=HMMTigr db_id=TIGR00313 from=121 to=600 evalue=1.1e-169 interpro_id=IPR004459 interpro_description=Cobyric acid synthase CobQ GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: cobalamin biosynthetic process (GO:0009236))
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ACD75_136_24
uncultured bacterium, Bacteria
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Not on your lists |
comp(24083..24274)
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24083..24274 - (rbs_motif=AGGAG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD40425.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
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ACD75_136_25
uncultured bacterium, Bacteria
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Not on your lists |
25171..25584
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Nucleoside diphosphate kinase n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K0X9_DESAC (db=UNIREF evalue=4.0e-65 bit_score=249.0 identity=83.94 coverage=98.5507246376812)
nucleoside diphosphate kinase (EC:2.7.4.6)
NDP_KINASES (db=PatternScan db_id=PS00469 from=112 to=120 evalue=0.0 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
no description (db=HMMSmart db_id=SM00562 from=1 to=137 evalue=6.3e-71 interpro_id=IPR001564 interpro_description=Nucleoside diphosphate kinase, core GO=Molecular Function: nucleoside diphosphate kinase activity (GO:0004550), Molecular Function: ATP binding (GO:0005524), Biological Process: GTP biosynthetic process (GO:0006183), Biological Process: UTP biosynthetic process (GO:0006228), Biological Process: CTP biosynthetic process (GO:0006241))
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ACD75_136_26
uncultured bacterium, Bacteria
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Not on your lists |
comp(25635..27014)
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exodeoxyribonuclease VII, large chain
exodeoxyribonuclease VII, large chain
Probable exodeoxyribonuclease VII, large chain n=1 Tax=Desulfotalea psychrophila RepID=Q6ALV1_DESPS (db=UNIREF evalue=4.0e-109 bit_score=399.0 identity=50.9 coverage=94.3478260869565)
seg (db=Seg db_id=seg from=116 to=127)
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ACD75_136_27
uncultured bacterium, Bacteria
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Not on your lists |
27106..27843
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hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=56 to=78)
TPR-like (db=superfamily db_id=SSF48452 from=120 to=245 evalue=5.9e-10)
no description (db=Gene3D db_id=G3DSA:1.25.40.10 from=124 to=245 evalue=1.5e-07 interpro_id=IPR011990 interpro_description=Tetratricopeptide-like helical GO=Molecular Function: binding (GO:0005488))
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ACD75_136_28
uncultured bacterium, Bacteria
|
Not on your lists |
27840..28697
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Pantothenate synthetase n=1 Tax=Desulfotalea psychrophila RepID=PANC_DESPS (db=UNIREF evalue=3.0e-87 bit_score=325.0 identity=54.04 coverage=98.2517482517483)
pantoate-beta-alanine ligase
CYTIDYLATE KINASE/PANTOATE-BETA-ALANINE LIGASE (db=HMMPanther db_id=PTHR21299 from=3 to=281 evalue=4.0e-118)
PANTOATE-BETA-ALANINE LIGASE (db=HMMPanther db_id=PTHR21299:SF1 from=3 to=281 evalue=4.0e-118 interpro_id=IPR003721 interpro_description=Pantoate-beta-alanine ligase GO=Molecular Function: pantoate-beta-alanine ligase activity (GO:0004592), Biological Process: pantothenate biosynthetic process (GO:0015940))
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ACD75_136_29
uncultured bacterium, Bacteria
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Not on your lists |
28751..29953
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putative PLP-dependent enzyme possibly involved in cell wall biogenesis
putative PLP-dependent enzyme possibly involved in cell wall biogenesis
Related to aminotransferase n=1 Tax=Desulfotalea psychrophila RepID=Q6ALV5_DESPS (db=UNIREF evalue=2.0e-165 bit_score=585.0 identity=71.61 coverage=95.5112219451372)
seg (db=Seg db_id=seg from=3 to=15)
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ACD75_136_30
uncultured bacterium, Bacteria
|
Not on your lists |
comp(29950..30369)
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Cell Wall Hydrolase
Hydrolase_2 (db=HMMPfam db_id=PF07486 from=19 to=120 evalue=2.1e-17 interpro_id=IPR011105 interpro_description=Cell wall hydrolase, SleB GO=Cellular Component: cell wall (GO:0005618), Biological Process: spore germination (GO:0009847), Molecular Function: hydrolase activity (GO:0016787))
SPORE CORTEX-LYTIC ENZYME (db=HMMPanther db_id=PTHR21666:SF6 from=14 to=54 evalue=0.00079)
PEPTIDASE-RELATED (db=HMMPanther db_id=PTHR21666 from=14 to=54 evalue=0.00079)
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