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ACD75_206

Alias: ACD75_3067.18482.31

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD75_206_1

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3..218
DNA (216bp) protein (72aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Desulfatibacillum alkenivorans AK-01 RepID=B8FJ27_DESAA (db=UNIREF evalue=2.0e-18 bit_score=94.4 identity=62.86 coverage=94.4444444444444)
MTHFR_C (db=HMMPfam db_id=PF12225 from=1 to=54 evalue=4.6e-18 interpro_id=IPR022026 interpro_description=Methylene-tetrahydrofolate reductase C-terminal)
Uncharacterized protein {ECO:0000313|EMBL:EKD37547.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_206_2

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215..1138
DNA (924bp) protein (308aa)
methylenetetrahydrofolate reductase
methylenetetrahydrofolate reductase
Methylenetetrahydrofolate reductase n=1 Tax=Desulfococcus oleovorans Hxd3 RepID=A8ZXJ9_DESOH (db=UNIREF evalue=2.0e-119 bit_score=432.0 identity=65.03 coverage=99.025974025974)
FAD-linked oxidoreductase (db=superfamily db_id=SSF51730 from=4 to=304 evalue=4.9e-73)
ACD75_206_3

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comp(1161..1487)
DNA (327bp) protein (109aa)
1161..1487 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD37549.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_206_4

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1716..2243
DNA (528bp) protein (176aa)
1716..2243 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD37537.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_206_5

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2280..2786
DNA (507bp) protein (169aa)
ACT-like (db=superfamily db_id=SSF55021 from=87 to=165 evalue=8.3e-07)
Uncharacterized protein {ECO:0000313|EMBL:EKD37538.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD75_206_6

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2823..4358
DNA (1536bp) protein (512aa)
Sensor protein n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LM33_SYNFM (db=UNIREF evalue=6.0e-141 bit_score=504.0 identity=50.3 coverage=96.2890625)
two component system sensor histidine kinase (EC:2.7.13.3)
two component system sensor histidine kinase (EC:2.7.13.3)
coiled-coil (db=Coil db_id=coil from=253 to=281 evalue=NA)
ACD75_206_7

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4523..6247
DNA (1725bp) protein (575aa)
4Fe-4S ferredoxin
seg (db=Seg db_id=seg from=88 to=99)
transmembrane_regions (db=TMHMM db_id=tmhmm from=155 to=177)
transmembrane_regions (db=TMHMM db_id=tmhmm from=123 to=142)
ACD75_206_8

Not on your lists

6244..7170
DNA (927bp) protein (309aa)
CoB--CoM heterodisulfide reductase
seg (db=Seg db_id=seg from=296 to=303)
seg (db=Seg db_id=seg from=247 to=266)
CCG (db=HMMPfam db_id=PF02754 from=187 to=236 evalue=2.5e-09 interpro_id=IPR004017 interpro_description=Cysteine-rich domain)
ACD75_206_9

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7238..7999
DNA (762bp) protein (254aa)
AcsF n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QAY5_DESAH (db=UNIREF evalue=3.0e-98 bit_score=361.0 identity=69.84 coverage=98.8188976377953)
acsF; protein AcsF
acsF; protein AcsF
Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type (db=HMMPIR db_id=PIRSF005647 from=1 to=252 evalue=4.6e-61 interpro_id=IPR014433 interpro_description=Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type)
ACD75_206_10

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8259..8945
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QCA1_DESAH (db=UNIREF evalue=4.0e-58 bit_score=227.0 identity=47.72 coverage=95.6331877729258)
hypothetical protein
zf-NADH-PPase (db=HMMPfam db_id=PF09297 from=21 to=46 evalue=4.5e-05 interpro_id=IPR015376 interpro_description=Zinc ribbon, NADH pyrophosphatase GO=Molecular Function: hydrolase activity (GO:0016787), Molecular Function: metal ion binding (GO:0046872))
Uncharacterized protein {ECO:0000313|EMBL:EKD37543.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_206_11

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9155..10585
DNA (1431bp) protein (477aa)
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator
Related to two-component system response regulator (Ntr family) n=1 Tax=Desulfotalea psychrophila RepID=Q6AJN0_DESPS (db=UNIREF evalue=4.0e-178 bit_score=628.0 identity=67.25 coverage=95.3878406708595)
SIGMA54_INTERACT_1 (db=PatternScan db_id=PS00675 from=176 to=189 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
ACD75_206_12

Not on your lists

10591..12288
DNA (1698bp) protein (566aa)
PAS domain S-box
PAS domain S-box
Sensor protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJM9_DESPS (db=UNIREF evalue=2.0e-114 bit_score=417.0 identity=47.29 coverage=84.2756183745583)
transmembrane_regions (db=TMHMM db_id=tmhmm from=22 to=44)
ACD75_206_13

Not on your lists

comp(12402..13034)
DNA (633bp) protein (211aa)
hypothetical protein (db=KEGG evalue=5.0e-12 bit_score=74.3 identity=32.46 coverage=53.5545023696682)
Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AJM8_DESPS (db=UNIREF evalue=6.0e-12 bit_score=74.3 identity=32.46 coverage=53.5545023696682)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=40)
seg (db=Seg db_id=seg from=21 to=39)
ACD75_206_14

Not on your lists

comp(13191..14468)
DNA (1278bp) protein (426aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Desulfotalea psychrophila RepID=MURA_DESPS (db=UNIREF evalue=5.0e-166 bit_score=587.0 identity=70.52 coverage=99.2957746478873)
seg (db=Seg db_id=seg from=24 to=36)
ACD75_206_15

Not on your lists

comp(14501..15376)
DNA (876bp) protein (292aa)
(protein release factor)-glutamine N5-methyltransferase (EC:2.1.1.-)
N6_MTASE (db=PatternScan db_id=PS00092 from=187 to=193 evalue=0.0 interpro_id=IPR002052 interpro_description=DNA methylase, N-6 adenine-specific, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
RF_mod_PrmC: protein-(glutamine-N5) methy (db=HMMTigr db_id=TIGR03534 from=25 to=286 evalue=1.2e-97 interpro_id=IPR019874 interpro_description=Protein-(glutamine-N5) methyltransferase, release factor-specific)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=3 to=287 evalue=1.6e-58)
ACD75_206_16

Not on your lists

comp(15446..16516)
DNA (1071bp) protein (357aa)
prfA; peptide chain release factor 1
prfA; peptide chain release factor 1
Peptide chain release factor 1 n=1 Tax=Desulfotalea psychrophila RepID=RF1_DESPS (db=UNIREF evalue=1.0e-149 bit_score=533.0 identity=78.09 coverage=99.4397759103641)
seg (db=Seg db_id=seg from=72 to=92)
ACD75_206_17

Not on your lists


comp(16637..16864)
DNA (228bp) protein (76aa)
ribosomal protein L31
50S ribosomal protein L31 n=1 Tax=Desulfotalea psychrophila RepID=RL31_DESPS (db=UNIREF evalue=8.0e-27 bit_score=122.0 identity=81.16 coverage=89.4736842105263)
RIBOSOMAL_L31 (db=PatternScan db_id=PS01143 from=34 to=55 evalue=0.0 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L31: ribosomal protein L31 (db=HMMTigr db_id=TIGR00105 from=1 to=66 evalue=1.9e-35 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD75_206_18

Not on your lists

comp(17004..18254)
DNA (1251bp) protein (417aa)
Probable transcription termination factor Rho n=1 Tax=Desulfotalea psychrophila RepID=Q6AJM3_DESPS (db=UNIREF evalue=0.0 bit_score=761.0 identity=88.43 coverage=99.2805755395683)
rho; transcription termination factor Rho
rho; transcription termination factor Rho
rho: transcription termination factor Rho (db=HMMTigr db_id=TIGR00767 from=1 to=416 evalue=2.0e-224 interpro_id=IPR004665 interpro_description=Transcription termination factor Rho GO=Molecular Function: transcription termination factor activity (GO:0003715), Molecular Function: RNA binding (GO:0003723), Molecular Function: ATP binding (GO:0005524), Biological Process: transcription termination (GO:0006353), Molecular Function: RNA-dependent ATPase activity (GO:0008186))
Displaying 18 items

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