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ACD75_282

Alias: ACD75_1870.9862.58

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD75_282_1

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comp(2..190)
DNA (189bp) protein (63aa)
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
Uncharacterized protein {ECO:0000313|EMBL:EKD38748.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P9F7_DESSD
fragmented gene kelly wrighton (12/4/12)
ACD75_282_2

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658..906
DNA (249bp) protein (83aa)
658..906 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD38743.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_282_3

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864..1205
DNA (342bp) protein (114aa)
864..1205 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD38744.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_282_4

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1530..1847
DNA (318bp) protein (106aa)
seg (db=Seg db_id=seg from=79 to=91)
Uncharacterized protein {ECO:0000313|EMBL:EKD38745.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_282_5

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comp(1816..2070)
DNA (255bp) protein (85aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=48 to=70)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
Uncharacterized protein {ECO:0000313|EMBL:EKD38746.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_282_6

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comp(2067..2372)
DNA (306bp) protein (102aa)
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit
seg (db=Seg db_id=seg from=70 to=87)
transmembrane_regions (db=TMHMM db_id=tmhmm from=24 to=46)
transmembrane_regions (db=TMHMM db_id=tmhmm from=67 to=89)
ACD75_282_7

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2516..3307
DNA (792bp) protein (264aa)
2516..3307 + (rbs_motif=GGA/GAG/AGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD38740.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_282_8

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3420..3620
DNA (201bp) protein (67aa)
3420..3620 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD38741.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_282_9
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3610..3717)
DNA (108bp) protein (36aa)
Oxidored_q2 (db=HMMPfam db_id=PF00420 from=2 to=33 evalue=3.6e-06 interpro_id=IPR001133 interpro_description=NADH:ubiquinone/quinone oxidoreductase, chain 4L GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Biological Process: ATP synthesis coupled electron transport (GO:0042773), Biological Process: oxidation reduction (GO:0055114))
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) (EC:1.6.5.3) Tax=GWB2_Desulfobacterales_56_26_curated
ACD75_282_10

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comp(3983..4528)
DNA (546bp) protein (182aa)
NADH:ubiquinone oxidoreductase subunit 6 (chain J) (EC:1.6.5.3)
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174)
transmembrane_regions (db=TMHMM db_id=tmhmm from=103 to=125)
transmembrane_regions (db=TMHMM db_id=tmhmm from=68 to=90)
ACD75_282_11

Not on your lists

comp(4525..4965)
DNA (441bp) protein (147aa)
NADH:ubiquinone oxidoreductase chain I-like protein (EC:1.6.5.3)
seg (db=Seg db_id=seg from=81 to=91)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=62 to=73 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
NuoI: NADH-quinone oxidoreductase, chain I (db=HMMTigr db_id=TIGR01971 from=18 to=141 evalue=1.2e-35 interpro_id=IPR010226 interpro_description=NADH-quinone oxidoreductase, chain I GO=Cellular Component: membrane (GO:0016020), Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
ACD75_282_12
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4966..5961)
DNA (996bp) protein (332aa)
NADH:ubiquinone oxidoreductase subunit 1 (chain H) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit H n=1 Tax=Desulfotalea psychrophila RepID=NUOH_DESPS (db=UNIREF evalue=2.0e-127 bit_score=458.0 identity=75.17 coverage=90.6626506024096)
transmembrane_regions (db=TMHMM db_id=tmhmm from=184 to=206)
transmembrane_regions (db=TMHMM db_id=tmhmm from=239 to=261)
ACD75_282_13
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5974..7092)
DNA (1119bp) protein (373aa)
NADH:ubiquinone oxidoreductase 49 kD subunit 7 (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Desulfotalea psychrophila RepID=NUOD_DESPS (db=UNIREF evalue=8.0e-152 bit_score=540.0 identity=76.88 coverage=99.4638069705094)
seg (db=Seg db_id=seg from=168 to=181)
seg (db=Seg db_id=seg from=285 to=303)
ACD75_282_14

Not on your lists

comp(7089..7622)
DNA (534bp) protein (178aa)
NADH:ubiquinone oxidoreductase 27 kD subunit
seg (db=Seg db_id=seg from=17 to=35)
seg (db=Seg db_id=seg from=36 to=43)
Nqo5-like (db=superfamily db_id=SSF143243 from=34 to=175 evalue=3.3e-34)
ACD75_282_15
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7687..8184)
DNA (498bp) protein (166aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
nuoB_fam: NADH-quinone oxidoreductase, B sub (db=HMMTigr db_id=TIGR01957 from=10 to=156 evalue=2.3e-90 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
NADH-PLASTOQUINONE OXIDOREDUCTASE (db=HMMPanther db_id=PTHR11995:SF2 from=17 to=149 evalue=2.3e-73 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
NADH DEHYDROGENASE (db=HMMPanther db_id=PTHR11995 from=17 to=149 evalue=2.3e-73 interpro_id=IPR014406 interpro_description=[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
ACD75_282_16
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8154..8579)
DNA (426bp) protein (142aa)
NADH:ubiquinone oxidoreductase subunit 3 (chain A) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit n=1 Tax=Desulfotalea psychrophila RepID=Q6ANM4_DESPS (db=UNIREF evalue=8.0e-33 bit_score=142.0 identity=73.33 coverage=92.9577464788732)
transmembrane_regions (db=TMHMM db_id=tmhmm from=108 to=130)
transmembrane_regions (db=TMHMM db_id=tmhmm from=71 to=93)
ACD75_282_17
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8884..9858
DNA (975bp) protein (325aa)
Related to transcriptional regulator n=1 Tax=Desulfotalea psychrophila RepID=Q6ANM2_DESPS (db=UNIREF evalue=4.0e-150 bit_score=534.0 identity=76.47 coverage=99.0769230769231)
transcriptional regulator
transcriptional regulator
LysR_substrate (db=HMMPfam db_id=PF03466 from=90 to=293 evalue=4.2e-40 interpro_id=IPR005119 interpro_description=LysR, substrate-binding)
Displaying 17 items

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