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ACD75_830

Alias: ACD75_3380.16018.32

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD75_830_1

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comp(1..108)
DNA (108bp) protein (36aa)
1..108 - (rbs_motif=GGAG/GAGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD37286.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_830_2

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comp(149..346)
DNA (198bp) protein (66aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Desulfurivibrio alkaliphilus AHT2 RepID=C8QZE7_9DELT (db=UNIREF evalue=5.0e-14 bit_score=80.1 identity=64.52 coverage=92.4242424242424)
seg (db=Seg db_id=seg from=51 to=54)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=12 to=23 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD75_830_3

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comp(648..2225)
DNA (1578bp) protein (526aa)
Putative uncharacterized protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AQL6_DESPS (db=UNIREF evalue=0.0 bit_score=725.0 identity=65.02 coverage=99.6197718631179)
hypothetical protein
hypothetical protein
seg (db=Seg db_id=seg from=158 to=167)
ACD75_830_4

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comp(2343..3170)
DNA (828bp) protein (276aa)
hypothetical protein
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=12 to=274 evalue=3.5e-48)
Met_10 (db=HMMPfam db_id=PF02475 from=22 to=223 evalue=5.8e-47 interpro_id=IPR003402 interpro_description=Protein of unknown function Met10)
METHIONINE 10+ HOMOLOG (db=HMMPanther db_id=PTHR23245:SF25 from=15 to=185 evalue=7.4e-25)
ACD75_830_5

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comp(3286..3486)
DNA (201bp) protein (67aa)
cold-shock DNA-binding protein family
COLD_SHOCK (db=PatternScan db_id=PS00352 from=15 to=33 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site)
COLD SHOCK DOMAIN CONTAINING PROTEINS (db=HMMPanther db_id=PTHR11544 from=1 to=66 evalue=1.8e-37)
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=66 evalue=4.7e-35 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD75_830_6

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3780..4616
DNA (837bp) protein (279aa)
ferredoxin-NADP(+) reductase subunit alpha
ferredoxin-NADP(+) reductase subunit alpha
Oxidoreductase, NAD-binding n=1 Tax=Desulfococcus multivorans RepID=Q2N536_9DELT (db=UNIREF evalue=3.0e-115 bit_score=417.0 identity=78.68 coverage=97.1326164874552)
seg (db=Seg db_id=seg from=99 to=113)
ACD75_830_7

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5222..6154
DNA (933bp) protein (311aa)
NADPH-dependent glutamate synthase, small subunit n=1 Tax=Desulfococcus multivorans RepID=Q2N537_9DELT (db=UNIREF evalue=1.0e-140 bit_score=502.0 identity=81.94 coverage=99.3569131832797)
gltD; glutamate synthase small subunit GltD (EC:1.4.1.13)
gltD; glutamate synthase small subunit GltD (EC:1.4.1.13)
seg (db=Seg db_id=seg from=169 to=180)
ACD75_830_8

Not on your lists

6903..7262
DNA (360bp) protein (120aa)
NADH dehydrogenase subunit A (EC:1.6.5.3)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
transmembrane_regions (db=TMHMM db_id=tmhmm from=88 to=110)
ACD75_830_9

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7253..7765
DNA (513bp) protein (171aa)
NADH dehydrogenase subunit B (EC:1.6.5.3)
nuoB_fam: NADH-quinone oxidoreductase, B sub (db=HMMTigr db_id=TIGR01957 from=12 to=155 evalue=4.0e-95 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
NADH DEHYDROGENASE (db=HMMPanther db_id=PTHR11995 from=5 to=159 evalue=1.3e-85 interpro_id=IPR014406 interpro_description=[NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
NADH-PLASTOQUINONE OXIDOREDUCTASE (db=HMMPanther db_id=PTHR11995:SF2 from=5 to=159 evalue=1.3e-85 interpro_id=IPR006138 interpro_description=NADH:ubiquinone oxidoreductase, 20kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: quinone binding (GO:0048038), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
ACD75_830_10

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comp(7782..8897)
DNA (1116bp) protein (372aa)
seg (db=Seg db_id=seg from=170 to=182)
Uncharacterized protein {ECO:0000313|EMBL:EKD37284.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD75_830_11

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9138..9539
DNA (402bp) protein (134aa)
NADH dehydrogenase subunit D; NADH dehydrogenase subunit C (EC:1.6.5.3)
NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT (db=HMMPanther db_id=PTHR11993 from=1 to=133 evalue=6.4e-45)
Complex1_49kDa (db=HMMPfam db_id=PF00346 from=1 to=133 evalue=7.2e-31 interpro_id=IPR001135 interpro_description=NADH-quinone oxidoreductase, subunit D GO=Molecular Function: oxidoreductase activity, acting on NADH or NADPH (GO:0016651), Molecular Function: quinone binding (GO:0048038), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
HydB/Nqo4-like (db=superfamily db_id=SSF56762 from=1 to=133 evalue=6.1e-28)
ACD75_830_12

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9536..10042
DNA (507bp) protein (169aa)
NADH dehydrogenase subunit E (EC:1.6.5.3)
COMPLEX1_24K (db=PatternScan db_id=PS01099 from=125 to=143 evalue=0.0 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
nuoE_fam: NADH-quinone oxidoreductase, E sub (db=HMMTigr db_id=TIGR01958 from=23 to=168 evalue=1.0e-63 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
Complex1_24kDa (db=HMMPfam db_id=PF01257 from=25 to=168 evalue=7.1e-53 interpro_id=IPR002023 interpro_description=NADH:ubiquinone oxidoreductase, 24kDa subunit GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: NAD or NADH binding (GO:0051287), Biological Process: oxidation reduction (GO:0055114))
ACD75_830_13

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10874..11404
DNA (531bp) protein (177aa)
NADH dehydrogenase subunit F (EC:1.6.5.3)
COMPLEX1_51K_2 (db=PatternScan db_id=PS00645 from=90 to=101 evalue=0.0 interpro_id=IPR001949 interpro_description=NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Molecular Function: FMN binding (GO:0010181), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539), Biological Process: oxidation reduction (GO:0055114))
NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 (NDUFV1) (db=HMMPanther db_id=PTHR11780 from=2 to=169 evalue=3.3e-65)
Nqo1C-terminal domain-like (db=superfamily db_id=SSF140490 from=73 to=176 evalue=3.8e-34)
ACD75_830_14

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11413..12975
DNA (1563bp) protein (521aa)
NADH:ubiquinone oxidoreductase subunit G, iron-sulfur-binding protein
NADH:ubiquinone oxidoreductase subunit G, iron-sulfur-binding protein
Ferredoxin n=1 Tax=bacterium S5 RepID=D3C068_9BACT (db=UNIREF evalue=1.0e-127 bit_score=460.0 identity=50.85 coverage=98.6564299424184)
seg (db=Seg db_id=seg from=340 to=355)
ACD75_830_15

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12962..14248
DNA (1287bp) protein (429aa)
NADH dehydrogenase subunit H (EC:1.6.5.3)
transmembrane_regions (db=TMHMM db_id=tmhmm from=163 to=185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=365 to=387)
transmembrane_regions (db=TMHMM db_id=tmhmm from=408 to=427)
ACD75_830_16

Not on your lists

14272..14796
DNA (525bp) protein (175aa)
NADH dehydrogenase subunit I (EC:1.6.5.3)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=118 to=129 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=77 to=88 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
NADH-UBIQUINONE OXIDOREDUCTASE 1, CHAIN 1 (db=HMMPanther db_id=PTHR10849 from=8 to=168 evalue=1.1e-35)
ACD75_830_17

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14801..15310
DNA (510bp) protein (170aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=bacterium S5 RepID=D3C065_9BACT (db=UNIREF evalue=2.0e-25 bit_score=117.0 identity=59.02 coverage=71.1764705882353)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=147 to=163)
ACD75_830_18

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15307..15603
DNA (297bp) protein (99aa)
seg (db=Seg db_id=seg from=35 to=47)
transmembrane_regions (db=TMHMM db_id=tmhmm from=58 to=80)
seg (db=Seg db_id=seg from=58 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=26 to=48)
ACD75_830_19

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15608..16072
DNA (465bp) protein (155aa)
proton-translocating NADH-quinone oxidoreductase subunit L
Proton-translocating NADH-quinone oxidoreductase, chain L n=1 Tax=bacterium S5 RepID=D3C063_9BACT (db=UNIREF evalue=3.0e-37 bit_score=157.0 identity=58.87 coverage=90.3225806451613)
seg (db=Seg db_id=seg from=49 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=96 to=118)
Displaying 19 items

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