ggKbase home page

ACD75_980

Alias: ACD75_66638.2631.14

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD75_980_1
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..214
DNA (213bp) protein (71aa)
cheA-3; chemotaxis sensor histidine kinase CheA
CheA signal transduction histidine kinase n=2 Tax=Geobacter RepID=C6E094_GEOSM (db=UNIREF evalue=2.0e-24 bit_score=114.0 identity=98.57 coverage=97.1830985915493)
seg (db=Seg db_id=seg from=47 to=58)
CheW-like (db=superfamily db_id=SSF50341 from=5 to=70 evalue=1.8e-13 interpro_id=IPR002545 interpro_description=CheW-like protein GO=Molecular Function: signal transducer activity (GO:0004871), Cellular Component: intracellular (GO:0005622), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165))
ACD75_980_2
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

552..914
DNA (363bp) protein (121aa)
cheC; chemotaxis protein phosphatase CheC
seg (db=Seg db_id=seg from=109 to=120)
CheC-like (db=superfamily db_id=SSF103039 from=1 to=120 evalue=9.4e-20)
no description (db=Gene3D db_id=G3DSA:3.40.1550.10 from=1 to=120 evalue=2.5e-17)
ACD75_980_3
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1040..1750
DNA (711bp) protein (237aa)
outer membrane lipoprotein carrier/sorting protein LolA rbh
outer membrane lipoprotein carrier/sorting protein LolA rbh
Outer membrane lipoprotein carrier protein LolA n=2 Tax=Geobacter RepID=B5ED62_GEOBB (db=UNIREF evalue=2.0e-123 bit_score=444.0 identity=100.0 coverage=99.1561181434599)
SSF89392 (db=superfamily db_id=SSF89392 from=28 to=236 evalue=3.99998544139379e-38)
ACD75_980_4
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1961..2446
DNA (486bp) protein (162aa)
UPF0234 protein Gbem_0619 n=3 Tax=Geobacter RepID=Y619_GEOBB (db=UNIREF evalue=3.0e-85 bit_score=316.0 identity=100.0 coverage=98.7654320987654)
yajQ; putative nucleotide-binding protein rbh
yajQ; putative nucleotide-binding protein rbh
DUF520 (db=HMMPfam db_id=PF04461 from=1 to=160 evalue=1.70000000000001e-63 interpro_id=IPR007551 interpro_description=Protein of unknown function DUF520)
ACD75_980_5

Not on your lists

2467..2667
DNA (201bp) protein (67aa)
rimO; ribosomal protein S12 methylthiotransferase
UPF0004 (db=HMMPfam db_id=PF00919 from=8 to=66 evalue=1.9e-19 interpro_id=IPR013848 interpro_description=Methylthiotransferase, N-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
RADICAL SAM PROTEINS (db=HMMPanther db_id=PTHR11918 from=7 to=67 evalue=7.9e-09 interpro_id=IPR005839 interpro_description=Methylthiotransferase GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
MTTASE_N (db=ProfileScan db_id=PS51449 from=7 to=67 evalue=16.882 interpro_id=IPR013848 interpro_description=Methylthiotransferase, N-terminal GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: RNA modification (GO:0009451), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
Displaying 5 items

View Taxonomy