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ACD75_1359

Alias: ACD75_132.7782.31

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD75_1359_1

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1..732
DNA (732bp) protein (244aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Syntrophobacter fumaroxidans MPOB RepID=A0LMY2_SYNFM (db=UNIREF evalue=1.0e-84 bit_score=316.0 identity=61.83 coverage=97.1311475409836)
two component sigma54 specific Fis family transcriptional regulator
two component sigma54 specific Fis family transcriptional regulator
SIGMA54_INTERACT_2 (db=PatternScan db_id=PS00676 from=20 to=35 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
ACD75_1359_2

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comp(754..1629)
DNA (876bp) protein (292aa)
ferredoxin
ferredoxin
Related to polyferredoxin n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ69_DESPS (db=UNIREF evalue=2.0e-115 bit_score=418.0 identity=78.08 coverage=88.6986301369863)
seg (db=Seg db_id=seg from=5 to=31)
ACD75_1359_3

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comp(1676..2623)
DNA (948bp) protein (316aa)
Na-translocating NADH-quinone reductase, Nqr5 subunit
Na-translocating NADH-quinone reductase, Nqr5 subunit
Related to Na-translocating NADH-quinone reductase, Nqr5 subunit n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ70_DESPS (db=UNIREF evalue=3.0e-106 bit_score=388.0 identity=73.36 coverage=90.8227848101266)
seg (db=Seg db_id=seg from=258 to=272)
ACD75_1359_4

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comp(2620..3237)
DNA (618bp) protein (206aa)
electron transport complex RsxE subunit
Related to Na-translocating NADH-quinone reductase, Nqr4 subunit n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ71_DESPS (db=UNIREF evalue=6.0e-72 bit_score=273.0 identity=83.9 coverage=99.0291262135922)
transmembrane_regions (db=TMHMM db_id=tmhmm from=29 to=51)
seg (db=Seg db_id=seg from=180 to=191)
ACD75_1359_5

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comp(3257..4153)
DNA (897bp) protein (299aa)
Na-translocating NADH-quinone reductase (RnfG/NqrC)
Related to Na-translocating NADH-quinone reductase (RnfG/NqrC) n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ72_DESPS (db=UNIREF evalue=9.0e-79 bit_score=296.0 identity=50.0 coverage=99.3311036789298)
seg (db=Seg db_id=seg from=107 to=122)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD75_1359_6

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comp(4150..5205)
DNA (1056bp) protein (352aa)
Na-translocating NADH-quinone reductase, Nqr2 subunit rbh
Na-translocating NADH-quinone reductase, Nqr2 subunit rbh
Related to Na-translocating NADH-quinone reductase, Nqr2 subunit n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ73_DESPS (db=UNIREF evalue=3.0e-127 bit_score=458.0 identity=74.85 coverage=92.3295454545455)
seg (db=Seg db_id=seg from=263 to=278)
ACD75_1359_7

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comp(5300..6634)
DNA (1335bp) protein (445aa)
electron transport complex protein
electron transport complex protein
Probable electron transport complex protein n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ74_DESPS (db=UNIREF evalue=1.0e-178 bit_score=629.0 identity=73.7 coverage=97.9775280898876)
seg (db=Seg db_id=seg from=189 to=198)
ACD75_1359_8

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comp(6716..7699)
DNA (984bp) protein (328aa)
Related to dihydroorotate dehydrogenase n=1 Tax=Desulfotalea psychrophila RepID=Q6AQ75_DESPS (db=UNIREF evalue=1.0e-118 bit_score=429.0 identity=63.0 coverage=99.390243902439)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
FMN-linked oxidoreductases (db=superfamily db_id=SSF51395 from=1 to=306 evalue=1.7e-53)
missing FeS sites CxxCxx kelly wrighton (12/4/12)
Rnf operon goes A, E, G,D, C, ?. Could this be B- this operon structure would be one of three operon structures for RNF (biegel, 2011) kelly wrighton (12/4/12)
Displaying 8 items

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