Alias: ACD75_1030.4823.15
name | lists | location/seqs | annotations | notes |
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ACD75_1380_1
uncultured bacterium, Bacteria
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Not on your lists |
comp(3..707)
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tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=1 Tax=Syntrophus aciditrophicus SB RepID=EFTU_SYNAS (db=UNIREF evalue=1.0e-104 bit_score=382.0 identity=89.36 coverage=99.5744680851064)
seg (db=Seg db_id=seg from=138 to=158)
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=51 to=66 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
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ACD75_1380_2
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(738..1208)
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30S ribosomal protein S7 n=1 Tax=Syntrophus aciditrophicus SB RepID=RS7_SYNAS (db=UNIREF evalue=2.0e-67 bit_score=257.0 identity=76.92 coverage=98.7261146496815)
30S ribosomal protein S7
RIBOSOMAL_S7 (db=PatternScan db_id=PS00052 from=20 to=46 evalue=0.0 interpro_id=IPR020606 interpro_description=Ribosomal protein S7, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412))
rpsG_bact: ribosomal protein S7 (db=HMMTigr db_id=TIGR01029 from=3 to=156 evalue=2.0e-103 interpro_id=IPR005717 interpro_description=Ribosomal protein S7, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
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ACD75_1380_3
uncultured bacterium, Bacteria
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Not on your lists |
comp(1223..1594)
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30S ribosomal protein S12 n=2 Tax=Syntrophus aciditrophicus SB RepID=RS12_SYNAS (db=UNIREF evalue=6.0e-58 bit_score=226.0 identity=90.24 coverage=98.3870967741936)
30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=43 to=50 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsL_bact: ribosomal protein S12 (db=HMMTigr db_id=TIGR00981 from=1 to=123 evalue=1.0e-83 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
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ACD75_1380_4
GWC2_Syntrophus_56_31_curated, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(1658..4861)
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DNA-directed RNA polymerase subunit beta' n=1 Tax=Syntrophus aciditrophicus SB RepID=RPOC_SYNAS (db=UNIREF evalue=0.0 bit_score=1749.0 identity=81.72 coverage=98.7827715355805)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
seg (db=Seg db_id=seg from=313 to=324)
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partial rpoB. long, added contamination. possible geobacter?
hits to wrong desulfotalea rpoB (see Acd75_5497 rpo comment)
kelly wrighton
(11/16/12)
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