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ACD77_53

Alias: ACD77_111453.13731.10

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD77_53_1

Not on your lists

comp(1..630)
DNA (630bp) protein (210aa)
hypothetical protein
seg (db=Seg db_id=seg from=177 to=188)
seg (db=Seg db_id=seg from=4 to=17)
Uncharacterized protein {ECO:0000313|EMBL:EKD32559.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD77_53_2

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comp(703..1500)
DNA (798bp) protein (266aa)
seg (db=Seg db_id=seg from=117 to=125)
Uncharacterized protein {ECO:0000313|EMBL:EKD32547.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD77_53_3

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1588..2760
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AD21_9PORP (db=UNIREF evalue=9.0e-124 bit_score=447.0 identity=55.44 coverage=98.2097186700767)
proline dehydrogenase
proline dehydrogenase
FAD-linked oxidoreductase (db=superfamily db_id=SSF51730 from=67 to=388 evalue=7.3e-85)
ACD77_53_4

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2850..3167
DNA (318bp) protein (106aa)
hypothetical protein
Acyl-CoA N-acyltransferases (Nat) (db=superfamily db_id=SSF55729 from=2 to=95 evalue=4.5e-25 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
no description (db=Gene3D db_id=G3DSA:3.40.630.30 from=4 to=99 evalue=2.6e-24 interpro_id=IPR016181 interpro_description=Acyl-CoA N-acyltransferase)
Acetyltransf_1 (db=HMMPfam db_id=PF00583 from=19 to=68 evalue=8.7e-05 interpro_id=IPR022610 interpro_description=GCN5-related N-acetyltransferase, C-terminal)
ACD77_53_5

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comp(3206..4171)
DNA (966bp) protein (322aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=A7V9N9_BACUN (db=UNIREF evalue=5.0e-145 bit_score=517.0 identity=74.45 coverage=99.3788819875776)
NAD(P)-binding Rossmann-fold domains (db=superfamily db_id=SSF51735 from=3 to=178 evalue=4.4e-24)
ACD77_53_6

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comp(4196..4717)
DNA (522bp) protein (174aa)
4196..4717 - (rbs_motif=TAAA rbs_spacer=7bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD32551.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD77_53_7

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comp(4726..5118)
DNA (393bp) protein (131aa)
hypothetical protein
RmlC-like cupins (db=superfamily db_id=SSF51182 from=34 to=121 evalue=7.6e-12 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
Cupin_2 (db=HMMPfam db_id=PF07883 from=42 to=78 evalue=4.5e-06 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
Uncharacterized protein {ECO:0000313|EMBL:EKD32552.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD77_53_8

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comp(5126..6196)
DNA (1071bp) protein (357aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MWY8_9BACT (db=UNIREF evalue=5.0e-169 bit_score=597.0 identity=79.38 coverage=97.1988795518207)
dTDP_gluc_dehyt: dTDP-glucose 4,6-deh (db=HMMTigr db_id=TIGR01181 from=3 to=341 evalue=3.4e-191 interpro_id=IPR005888 interpro_description=dTDP-glucose 4,6-dehydratase GO=Molecular Function: dTDP-glucose 4,6-dehydratase activity (GO:0008460), Biological Process: nucleotide-sugar metabolic process (GO:0009225))
ACD77_53_9

Not on your lists

comp(6241..7179)
DNA (939bp) protein (313aa)
hypothetical protein
hypothetical protein
dTDP-4-dehydrorhamnose reductase n=1 Tax=Bacteroides sp. 9_1_42FAA RepID=C3PZ86_9BACE (db=UNIREF evalue=7.0e-82 bit_score=307.0 identity=48.84 coverage=87.8594249201278)
seg (db=Seg db_id=seg from=91 to=105)
ACD77_53_10

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comp(7189..7758)
DNA (570bp) protein (190aa)
hypothetical protein
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase (db=HMMTigr db_id=TIGR01221 from=2 to=179 evalue=5.5e-90 interpro_id=IPR000888 interpro_description=dTDP-4-dehydrorhamnose 3,5-epimerase related GO=Molecular Function: dTDP-4-dehydrorhamnose 3,5-epimerase activity (GO:0008830), Biological Process: lipopolysaccharide biosynthetic process (GO:0009103))
RmlC-like cupins (db=superfamily db_id=SSF51182 from=1 to=182 evalue=3.9e-72 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=1 to=178 evalue=3.7e-69 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
ACD77_53_11

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comp(7755..8627)
DNA (873bp) protein (291aa)
Glucose-1-phosphate thymidylyltransferase n=5 Tax=Bacteroides RepID=Q5L9T3_BACFN (db=UNIREF evalue=2.0e-141 bit_score=504.0 identity=82.07 coverage=99.3127147766323)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
rmlA: glucose-1-phosphate thymidylyltransfer (db=HMMTigr db_id=TIGR01207 from=2 to=290 evalue=8.9e-171 interpro_id=IPR005907 interpro_description=Glucose-1-phosphate thymidylyltransferase, long form GO=Molecular Function: glucose-1-phosphate thymidylyltransferase activity (GO:0008879), Biological Process: extracellular polysaccharide biosynthetic process (GO:0045226))
ACD77_53_12

Not on your lists

comp(8693..9772)
DNA (1080bp) protein (360aa)
hypothetical protein
Patatin family protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZMA4_9BACT (db=UNIREF evalue=9.0e-54 bit_score=214.0 identity=38.27 coverage=83.6111111111111)
seg (db=Seg db_id=seg from=5 to=19)
seg (db=Seg db_id=seg from=21 to=34)
ACD77_53_13

Not on your lists

9857..10375
DNA (519bp) protein (173aa)
hypothetical protein
FERRITIN (db=HMMPanther db_id=PTHR11431 from=4 to=162 evalue=6.0e-72 interpro_id=IPR001519 interpro_description=Ferritin, N-terminal GO=Molecular Function: binding (GO:0005488), Biological Process: iron ion transport (GO:0006826), Biological Process: cellular iron ion homeostasis (GO:0006879), Molecular Function: ferric iron binding (GO:0008199))
FERRITIN (db=HMMPanther db_id=PTHR11431:SF4 from=4 to=162 evalue=6.0e-72)
Ferritin-like (db=superfamily db_id=SSF47240 from=1 to=161 evalue=1.0e-55 interpro_id=IPR009078 interpro_description=Ferritin/ribonucleotide reductase-like GO=Molecular Function: oxidoreductase activity (GO:0016491), Molecular Function: transition metal ion binding (GO:0046914), Biological Process: oxidation reduction (GO:0055114))
ACD77_53_14

Not on your lists

comp(10620..11477)
DNA (858bp) protein (286aa)
sucD; succinate-CoA ligase subunit alpha (EC:6.2.1.-)
sucD; succinate-CoA ligase subunit alpha (EC:6.2.1.-)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=3 Tax=Prevotella RepID=C9PVG7_9BACT (db=UNIREF evalue=1.0e-107 bit_score=392.0 identity=71.23 coverage=99.3006993006993)
seg (db=Seg db_id=seg from=248 to=257)
ACD77_53_15

Not on your lists

comp(11494..12633)
DNA (1140bp) protein (380aa)
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Prevotella RepID=D1VWS6_9BACT (db=UNIREF evalue=2.0e-145 bit_score=519.0 identity=67.73 coverage=98.4210526315789)
sucC; Succinyl-CoA ligase [ADP-forming] subunit beta (EC:6.2.1.5)
sucC; Succinyl-CoA ligase [ADP-forming] subunit beta (EC:6.2.1.5)
SUCCINYL_COA_LIG_3 (db=PatternScan db_id=PS01217 from=250 to=274 evalue=0.0 interpro_id=IPR017866 interpro_description=Succinyl-CoA synthetase, beta subunit, conserved site)
ACD77_53_16

Not on your lists

12930..13730
DNA (801bp) protein (267aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Clostridium lentocellum DSM 5427 RepID=D5QZ61_9FIRM (db=UNIREF evalue=6.0e-23 bit_score=111.0 identity=30.13 coverage=83.5205992509363)
Transposase IS200-like (db=superfamily db_id=SSF143422 from=2 to=128 evalue=1.5e-09)
Transposase_17 (db=HMMPfam db_id=PF01797 from=14 to=70 evalue=2.8e-06 interpro_id=IPR002686 interpro_description=Transposase IS200-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transposase activity (GO:0004803), Biological Process: transposition, DNA-mediated (GO:0006313))
Displaying 16 items

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