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ACD77_94

Alias: ACD77_27270.25663.11

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD77_94_1

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comp(38..715)
DNA (678bp) protein (226aa)
hypothetical protein
Purine or other phosphorylase family 1 n=1 Tax=Chitinophaga pinensis DSM 2588 RepID=C7PRC0_CHIPD (db=UNIREF evalue=7.0e-31 bit_score=137.0 identity=38.39 coverage=88.4955752212389)
seg (db=Seg db_id=seg from=212 to=225)
Purine and uridine phosphorylases (db=superfamily db_id=SSF53167 from=1 to=224 evalue=1.5e-16)
ACD77_94_2

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763..1356
DNA (594bp) protein (198aa)
GTP cyclohydrolase I (EC:3.5.4.16)
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MY26_9BACT (db=UNIREF evalue=4.0e-82 bit_score=306.0 identity=75.65 coverage=96.969696969697)
GTP_CYCLOHYDROL_1_1 (db=PatternScan db_id=PS00859 from=74 to=90 evalue=0.0 interpro_id=IPR018234 interpro_description=GTP cyclohydrolase I, conserved site GO=Molecular Function: GTP cyclohydrolase I activity (GO:0003934), Cellular Component: cytoplasm (GO:0005737), Biological Process: tetrahydrofolate biosynthetic process (GO:0046654))
GTP_CYCLOHYDROL_1_2 (db=PatternScan db_id=PS00860 from=122 to=132 evalue=0.0 interpro_id=IPR018234 interpro_description=GTP cyclohydrolase I, conserved site GO=Molecular Function: GTP cyclohydrolase I activity (GO:0003934), Cellular Component: cytoplasm (GO:0005737), Biological Process: tetrahydrofolate biosynthetic process (GO:0046654))
ACD77_94_3

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comp(1359..2771)
DNA (1413bp) protein (471aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=165 to=191)
seg (db=Seg db_id=seg from=423 to=437)
ACD77_94_4

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comp(2755..3501)
DNA (747bp) protein (249aa)
hypothetical protein
Putative uncharacterized protein n=2 Tax=Bacteroides RepID=B5D2X2_9BACE (db=UNIREF evalue=7.0e-56 bit_score=220.0 identity=52.26 coverage=90.3614457831325)
seg (db=Seg db_id=seg from=120 to=146)
seg (db=Seg db_id=seg from=42 to=53)
ACD77_94_5

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3572..6451
DNA (2880bp) protein (960aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MT75_9BACT (db=UNIREF evalue=0.0 bit_score=991.0 identity=51.98 coverage=96.7708333333333)
seg (db=Seg db_id=seg from=860 to=870)
ACD77_94_6

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6482..7972
DNA (1491bp) protein (497aa)
hypothetical protein rbh
hypothetical protein rbh
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MTB4_9BACT (db=UNIREF evalue=2.0e-148 bit_score=529.0 identity=54.56 coverage=99.5975855130785)
seg (db=Seg db_id=seg from=432 to=447)
ACD77_94_7

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comp(7947..9356)
DNA (1410bp) protein (470aa)
hypothetical protein
hypothetical protein
tRNA nucleotidyltransferase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EFJ1_9SPHI (db=UNIREF evalue=2.0e-167 bit_score=592.0 identity=62.53 coverage=97.4468085106383)
seg (db=Seg db_id=seg from=221 to=232)
ACD77_94_8

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comp(9337..9744)
DNA (408bp) protein (136aa)
hypothetical protein
Type I restriction enzyme R protein {ECO:0000313|EMBL:EKD32092.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AXF6_KROS4
ACD77_94_9

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9826..10875
DNA (1050bp) protein (350aa)
hypothetical protein
DNA polymerase III, delta subunit n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FFT7_FLAJ1 (db=UNIREF evalue=2.0e-74 bit_score=282.0 identity=44.64 coverage=93.7142857142857)
holA: DNA polymerase III, delta subunit (db=HMMTigr db_id=TIGR01128 from=25 to=345 evalue=3.6e-37 interpro_id=IPR005790 interpro_description=DNA polymerase III, delta subunit GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA replication (GO:0006260))
DNA_pol3_delta (db=HMMPfam db_id=PF06144 from=29 to=197 evalue=1.3e-24 interpro_id=IPR010372 interpro_description=DNA polymerase III, delta GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD77_94_10

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comp(10877..11971)
DNA (1095bp) protein (365aa)
hypothetical protein
seg (db=Seg db_id=seg from=23 to=35)
seg (db=Seg db_id=seg from=352 to=363)
ALANINE_RACEMASE (db=PatternScan db_id=PS00395 from=33 to=42 evalue=0.0 interpro_id=IPR020622 interpro_description=Alanine racemase, pyridoxal-phosphate attachment site GO=Biological Process: alanine metabolic process (GO:0006522), Molecular Function: alanine racemase activity (GO:0008784))
ACD77_94_11

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12003..12548
DNA (546bp) protein (182aa)
seg (db=Seg db_id=seg from=35 to=46)
seg (db=Seg db_id=seg from=78 to=88)
Uncharacterized protein {ECO:0000313|EMBL:EKD32095.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD77_94_12

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13192..13884
DNA (693bp) protein (231aa)
coiled-coil (db=Coil db_id=coil from=66 to=94 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD32070.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD77_94_13

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13877..14554
DNA (678bp) protein (226aa)
hypothetical protein
hypothetical protein
Methyltransferase n=4 Tax=Bacteroides RepID=A6L1E8_BACV8 (db=UNIREF evalue=1.0e-87 bit_score=326.0 identity=67.87 coverage=97.3451327433628)
RSMI (db=PatternScan db_id=PS01296 from=81 to=92 evalue=0.0 interpro_id=IPR018063 interpro_description=Uncharacterised protein family UPF0011, conserved site)
EC:2.1.1.107 probably Jill Banfield (11/16/12)
ACD77_94_14

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14587..15495
DNA (909bp) protein (303aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=15 to=25)
FAMILY NOT NAMED (db=HMMPanther db_id=PTHR21180 from=84 to=270 evalue=4.2e-27)
ACD77_94_15

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15558..16463
DNA (906bp) protein (302aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MYJ9_9BACT (db=UNIREF evalue=3.0e-95 bit_score=351.0 identity=54.75 coverage=99.3377483443709)
ABC_TRANSPORTER_1 (db=PatternScan db_id=PS00211 from=132 to=146 evalue=0.0 interpro_id=IPR017871 interpro_description=ABC transporter, conserved site GO=Molecular Function: ATP binding (GO:0005524), Molecular Function: ATPase activity (GO:0016887))
ACD77_94_16

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16473..17822
DNA (1350bp) protein (450aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=402 to=424)
transmembrane_regions (db=TMHMM db_id=tmhmm from=351 to=373)
transmembrane_regions (db=TMHMM db_id=tmhmm from=316 to=338)
ACD77_94_17

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17834..18598
DNA (765bp) protein (255aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain (db=superfamily db_id=SSF55816 from=65 to=253 evalue=1.1e-41 interpro_id=IPR008334 interpro_description=5'-Nucleotidase, C-terminal GO=Biological Process: nucleotide catabolic process (GO:0009166), Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.780.10 from=65 to=235 evalue=2.1e-32 interpro_id=IPR008334 interpro_description=5'-Nucleotidase, C-terminal GO=Biological Process: nucleotide catabolic process (GO:0009166), Molecular Function: hydrolase activity (GO:0016787))
ACD77_94_18

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18612..19460
DNA (849bp) protein (283aa)
hypothetical protein
5_NUCLEOTIDASE_1 (db=PatternScan db_id=PS00785 from=29 to=41 evalue=0.0 interpro_id=IPR006146 interpro_description=5'-Nucleotidase, conserved site GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: hydrolase activity, acting on ester bonds (GO:0016788), Molecular Function: metal ion binding (GO:0046872))
5-NUCLEOTIDASE-RELATED (db=HMMPanther db_id=PTHR11575:SF7 from=4 to=279 evalue=4.3e-80)
5'-NUCLEOTIDASE-RELATED (db=HMMPanther db_id=PTHR11575 from=4 to=279 evalue=4.3e-80 interpro_id=IPR006179 interpro_description=5'-Nucleotidase/apyrase GO=Biological Process: nucleotide catabolic process (GO:0009166), Molecular Function: hydrolase activity (GO:0016787))
ACD77_94_19

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comp(19466..21226)
DNA (1761bp) protein (587aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MV74_9BACT (db=UNIREF evalue=2.0e-146 bit_score=523.0 identity=49.48 coverage=90.2896081771721)
seg (db=Seg db_id=seg from=164 to=171)
ACD77_94_20

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comp(21265..21825)
DNA (561bp) protein (187aa)
hypothetical protein
Putative uncharacterized protein n=3 Tax=Parabacteroides RepID=A7ABL4_9PORP (db=UNIREF evalue=4.0e-35 bit_score=150.0 identity=41.34 coverage=94.1176470588235)
no description (db=HMMSmart db_id=SM00563 from=27 to=136 evalue=1.4e-15 interpro_id=IPR002123 interpro_description=Phospholipid/glycerol acyltransferase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: acyltransferase activity (GO:0008415))
Acyltransferase (db=HMMPfam db_id=PF01553 from=28 to=135 evalue=1.6e-10 interpro_id=IPR002123 interpro_description=Phospholipid/glycerol acyltransferase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: acyltransferase activity (GO:0008415))
ACD77_94_21

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comp(21885..23591)
DNA (1707bp) protein (569aa)
Pyridine nucleotide-disulphide oxidoreductase n=4 Tax=Bacteroidales RepID=A6L9F3_PARD8 (db=UNIREF evalue=0.0 bit_score=686.0 identity=62.96 coverage=95.9578207381371)
pyridine nucleotide-disulfide oxidoreductase
pyridine nucleotide-disulfide oxidoreductase
seg (db=Seg db_id=seg from=6 to=17)
ACD77_94_22

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comp(23609..23959)
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=2 Tax=Parabacteroides RepID=A7AKI1_9PORP (db=UNIREF evalue=2.0e-26 bit_score=121.0 identity=50.85 coverage=97.4358974358974)
transcriptional regulator
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=10 to=109 evalue=1.4e-15)
no description (db=Gene3D db_id=G3DSA:1.10.10.10 from=27 to=100 evalue=3.5e-08 interpro_id=IPR011991 interpro_description=Winged helix-turn-helix transcription repressor DNA-binding)
ACD77_94_23

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24098..24577
DNA (480bp) protein (160aa)
hypothetical protein
Thioredoxin n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IP41_9BACT (db=UNIREF evalue=3.0e-47 bit_score=190.0 identity=66.15 coverage=80.625)
THIOREDOXIN_1 (db=PatternScan db_id=PS00194 from=71 to=89 evalue=0.0 interpro_id=IPR017937 interpro_description=Thioredoxin, conserved site GO=Biological Process: cell redox homeostasis (GO:0045454))
thioredoxin: thioredoxin (db=HMMTigr db_id=TIGR01068 from=53 to=154 evalue=8.1e-43 interpro_id=IPR005746 interpro_description=Thioredoxin GO=Biological Process: glycerol ether metabolic process (GO:0006662), Molecular Function: electron carrier activity (GO:0009055), Molecular Function: protein disulfide oxidoreductase activity (GO:0015035), Biological Process: cell redox homeostasis (GO:0045454))
ACD77_94_24

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24579..24935
DNA (357bp) protein (119aa)
hypothetical protein
MarR family transcriptional regulator n=7 Tax=Bacteroides RepID=C6YZB5_9BACE (db=UNIREF evalue=2.0e-27 bit_score=124.0 identity=61.39 coverage=83.1932773109244)
"Winged helix" DNA-binding domain (db=superfamily db_id=SSF46785 from=4 to=102 evalue=4.7e-15)
MarR (db=HMMPfam db_id=PF01047 from=30 to=83 evalue=4.7e-08 interpro_id=IPR000835 interpro_description=HTH transcriptional regulator, MarR GO=Molecular Function: transcription factor activity (GO:0003700), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
ACD77_94_25

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24946..25341
DNA (396bp) protein (132aa)
putative conserved protein
TT1751-like (db=superfamily db_id=SSF103247 from=1 to=131 evalue=8.3e-20 interpro_id=IPR005180 interpro_description=Protein of unknown function DUF302)
no description (db=Gene3D db_id=G3DSA:3.30.310.70 from=2 to=130 evalue=2.0e-14 interpro_id=IPR005180 interpro_description=Protein of unknown function DUF302)
DUF302 (db=HMMPfam db_id=PF03625 from=35 to=98 evalue=2.2e-11 interpro_id=IPR005180 interpro_description=Protein of unknown function DUF302)
ACD77_94_26

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25360..25701
DNA (342bp) protein (114aa)
hypothetical protein
DoxX protein n=7 Tax=Bacteroides RepID=D4VCG8_BACVU (db=UNIREF evalue=4.0e-22 bit_score=106.0 identity=47.66 coverage=91.2280701754386)
transmembrane_regions (db=TMHMM db_id=tmhmm from=59 to=81)
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=37)
Displaying 26 items

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