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ACD77_134

Alias: ACD77_8956.33245.11

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD77_134_1

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160..549
DNA (390bp) protein (130aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=93 to=115)
seg (db=Seg db_id=seg from=64 to=77)
transmembrane_regions (db=TMHMM db_id=tmhmm from=61 to=83)
ACD77_134_2

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515..877
DNA (363bp) protein (121aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
DUF2752 (db=HMMPfam db_id=PF10825 from=41 to=90 evalue=9.9e-19 interpro_id=IPR021215 interpro_description=Protein of unknown function DUF2752)
Uncharacterized protein {ECO:0000313|EMBL:EKD30872.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD77_134_3

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859..1593
DNA (735bp) protein (245aa)
hypothetical protein
hypothetical protein
Glycosyltransferase, group 2 family protein n=2 Tax=Prevotella RepID=D1W1A3_9BACT (db=UNIREF evalue=5.0e-93 bit_score=343.0 identity=67.35 coverage=97.5510204081633)
GLYCOSYLTRANSFERASE RELATED (db=HMMPanther db_id=PTHR10859 from=11 to=231 evalue=1.9e-46)
ACD77_134_4

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1608..2948
DNA (1341bp) protein (447aa)
hypothetical protein
hypothetical protein
Dihydroorotase n=1 Tax=Flavobacterium johnsoniae UW101 RepID=A5FMI4_FLAJ1 (db=UNIREF evalue=7.0e-120 bit_score=434.0 identity=49.55 coverage=98.4340044742729)
seg (db=Seg db_id=seg from=285 to=299)
ACD77_134_5

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2938..3846
DNA (909bp) protein (303aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VF07_CLOAI (db=UNIREF evalue=3.0e-28 bit_score=129.0 identity=35.45 coverage=86.7986798679868)
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=121)
seg (db=Seg db_id=seg from=51 to=60)
ACD77_134_6

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comp(3843..5984)
DNA (2142bp) protein (714aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM 17135 RepID=B5D203_9BACE (db=UNIREF evalue=0.0 bit_score=805.0 identity=56.84 coverage=98.5994397759104)
seg (db=Seg db_id=seg from=685 to=696)
ACD77_134_7

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comp(5977..7752)
DNA (1776bp) protein (592aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=5 Tax=Bacteroides RepID=A7V6S6_BACUN (db=UNIREF evalue=9.0e-134 bit_score=481.0 identity=52.17 coverage=92.9054054054054)
seg (db=Seg db_id=seg from=26 to=40)
ACD77_134_8

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comp(7819..8247)
DNA (429bp) protein (143aa)
seg (db=Seg db_id=seg from=126 to=142)
Uncharacterized protein {ECO:0000313|EMBL:EKD30878.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
hypothetical protein AJC13_02853 n=1 Tax=Alistipes sp. JC136 RepID=UPI00028903D6
ACD77_134_9

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comp(8281..10014)
DNA (1734bp) protein (578aa)
hypothetical protein
hypothetical protein
Putative Fe-S oxidoreductase n=4 Tax=Bacteroidales RepID=A6L9W6_PARD8 (db=UNIREF evalue=0.0 bit_score=705.0 identity=59.62 coverage=98.0968858131488)
MTTASE_RADICAL (db=PatternScan db_id=PS01278 from=306 to=326 evalue=0.0 interpro_id=IPR020612 interpro_description=Methylthiotransferase, conserved site GO=Cellular Component: cellular_component (GO:0005575), Molecular Function: 4 iron, 4 sulfur cluster binding (GO:0051539))
ACD77_134_10

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comp(10016..11794)
DNA (1779bp) protein (593aa)
hypothetical protein
hypothetical protein
Arginyl-tRNA synthetase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPS8_9BACT (db=UNIREF evalue=0.0 bit_score=775.0 identity=65.27 coverage=99.6627318718381)
seg (db=Seg db_id=seg from=309 to=321)
ACD77_134_11

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comp(11801..13153)
DNA (1353bp) protein (451aa)
hypothetical protein
hypothetical protein
Sodium/alanine symporter n=2 Tax=Bacteroides RepID=D2EZ07_9BACE (db=UNIREF evalue=6.0e-142 bit_score=507.0 identity=62.61 coverage=99.5565410199557)
transmembrane_regions (db=TMHMM db_id=tmhmm from=82 to=104)
ACD77_134_12

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comp(13315..15423)
DNA (2109bp) protein (703aa)
hypothetical protein
hypothetical protein
Peptidyl-dipeptidase n=7 Tax=Bacteroides RepID=A6L5U9_BACV8 (db=UNIREF evalue=0.0 bit_score=882.0 identity=60.14 coverage=99.4310099573257)
coiled-coil (db=Coil db_id=coil from=172 to=193 evalue=NA)
ACD77_134_13

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comp(15450..16310)
DNA (861bp) protein (287aa)
RNA polymerase sigma factor rpoD
RNA polymerase sigma factor rpoD
RNA polymerase sigma factor, sigma-70 family n=2 Tax=Alistipes RepID=D4IP86_9BACT (db=UNIREF evalue=3.0e-145 bit_score=518.0 identity=88.46 coverage=99.3031358885017)
coiled-coil (db=Coil db_id=coil from=212 to=233 evalue=NA)
ACD77_134_14

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comp(16363..17838)
DNA (1476bp) protein (492aa)
hypothetical protein
hypothetical protein
Putative uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0N061_9BACT (db=UNIREF evalue=6.0e-99 bit_score=365.0 identity=45.77 coverage=86.5853658536585)
seg (db=Seg db_id=seg from=410 to=421)
ACD77_134_15

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17877..19004
DNA (1128bp) protein (376aa)
hypothetical protein
hypothetical protein
hypothetical protein BACCOPRO_00566 n=1 Tax=Bacteroides coprophilus DSM 18228 RepID=UPI000197B632 (db=UNIREF evalue=3.0e-99 bit_score=365.0 identity=50.14 coverage=95.2127659574468)
dnan: DNA polymerase III, beta subunit (db=HMMTigr db_id=TIGR00663 from=1 to=373 evalue=8.3e-71 interpro_id=IPR001001 interpro_description=DNA polymerase III, beta chain GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed DNA polymerase activity (GO:0003887), Biological Process: DNA replication (GO:0006260), Molecular Function: 3'-5' exonuclease activity (GO:0008408), Cellular Component: DNA polymerase III complex (GO:0009360))
ACD77_134_16

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19019..19810
DNA (792bp) protein (264aa)
hypothetical protein
hypothetical protein
DNA polymerase III epsilon chain n=5 Tax=Bacteroidales RepID=A6L9V2_PARD8 (db=UNIREF evalue=8.0e-97 bit_score=356.0 identity=63.86 coverage=93.5606060606061)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=7 to=255 evalue=8.0e-48 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD77_134_17

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comp(19799..21076)
DNA (1278bp) protein (426aa)
hypothetical protein
hypothetical protein
Predicted flavoproteins n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IPV8_9BACT (db=UNIREF evalue=2.0e-84 bit_score=317.0 identity=46.15 coverage=89.4366197183099)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
Flavoprotein (IPRSCAN: succ dehydrog domain) Jill Banfield (11/16/12)
ACD77_134_18

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21124..22224
DNA (1101bp) protein (367aa)
iron ABC transporter substrate-binding protein
"Helical backbone" metal receptor (db=superfamily db_id=SSF53807 from=76 to=350 evalue=1.6e-35)
Peripla_BP_2 (db=HMMPfam db_id=PF01497 from=82 to=317 evalue=3.0e-21 interpro_id=IPR002491 interpro_description=Periplasmic binding protein GO=Molecular Function: iron ion transmembrane transporter activity (GO:0005381), Biological Process: high-affinity iron ion transport (GO:0006827))
no description (db=Gene3D db_id=G3DSA:3.40.50.1980 from=78 to=206 evalue=2.2e-12)
ACD77_134_19

Not on your lists

comp(22273..23346)
DNA (1074bp) protein (358aa)
hypothetical protein
hypothetical protein
Acetate and butyrate kinase n=8 Tax=Thermoanaerobacter RepID=B0K5W4_THEPX (db=UNIREF evalue=2.0e-109 bit_score=399.0 identity=59.83 coverage=98.3240223463687)
seg (db=Seg db_id=seg from=283 to=301)
ACD77_134_20

Not on your lists

comp(23350..24255)
DNA (906bp) protein (302aa)
hypothetical protein
Phosphotransacetylase n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VH17_CLOAI (db=UNIREF evalue=3.0e-93 bit_score=345.0 identity=57.19 coverage=98.3443708609272)
Phosphate acetyltransferase (db=HMMPIR db_id=PIRSF000428 from=3 to=301 evalue=9.4e-67 interpro_id=IPR012147 interpro_description=Phosphate acetyl/butyryltransferase GO=Molecular Function: acyltransferase activity (GO:0008415))
Isocitrate/Isopropylmalate dehydrogenase-like (db=superfamily db_id=SSF53659 from=2 to=300 evalue=2.5e-55)
ACD77_134_21

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comp(24282..25496)
DNA (1215bp) protein (405aa)
hypothetical protein
hypothetical protein
Acetate kinase n=1 Tax=Alistipes shahii WAL 8301 RepID=D4ILQ0_9BACT (db=UNIREF evalue=7.0e-138 bit_score=494.0 identity=59.0 coverage=98.2716049382716)
ACETATE_KINASE_1 (db=PatternScan db_id=PS01075 from=3 to=14 evalue=0.0 interpro_id=IPR000890 interpro_description=Acetate/butyrate kinase GO=Cellular Component: intracellular (GO:0005622), Biological Process: metabolic process (GO:0008152), Molecular Function: kinase activity (GO:0016301), Biological Process: phosphorylation (GO:0016310), Molecular Function: phosphotransferase activity, carboxyl group as acceptor (GO:0016774))
ACD77_134_22

Not on your lists

25617..27092
DNA (1476bp) protein (492aa)
ComEC/rec2-like protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=270 to=292)
transmembrane_regions (db=TMHMM db_id=tmhmm from=307 to=329)
transmembrane_regions (db=TMHMM db_id=tmhmm from=346 to=365)
ACD77_134_23

Not on your lists

comp(27089..27970)
DNA (882bp) protein (294aa)
hypothetical protein
Putative uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XM83_9FLAO (db=UNIREF evalue=4.0e-24 bit_score=115.0 identity=37.89 coverage=92.8571428571429)
transmembrane_regions (db=TMHMM db_id=tmhmm from=119 to=138)
seg (db=Seg db_id=seg from=74 to=85)
ACD77_134_24

Not on your lists

28048..29457
DNA (1410bp) protein (470aa)
Amidophosphoribosyltransferase n=7 Tax=Bacteroides RepID=A6L6X7_BACV8 (db=UNIREF evalue=1.0e-174 bit_score=616.0 identity=61.16 coverage=98.936170212766)
amidophosphoribosyltransferase
amidophosphoribosyltransferase
Amidophosphoribosyltransferase (db=HMMPIR db_id=PIRSF000485 from=1 to=467 evalue=5.7e-123 interpro_id=IPR005854 interpro_description=Amidophosphoribosyl transferase GO=Molecular Function: amidophosphoribosyltransferase activity (GO:0004044), Biological Process: purine base biosynthetic process (GO:0009113))
ACD77_134_25

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29556..29819
DNA (264bp) protein (88aa)
hypothetical protein
RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432 from=1 to=84 evalue=2.8e-29)
GLYCINE-RICH RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432:SF31 from=1 to=84 evalue=2.8e-29 interpro_id=IPR015465 interpro_description=RNA recognition motif, glycine rich protein)
no description (db=Gene3D db_id=G3DSA:3.30.70.330 from=2 to=82 evalue=1.1e-24 interpro_id=IPR012677 interpro_description=Nucleotide-binding, alpha-beta plait GO=Molecular Function: nucleotide binding (GO:0000166))
ACD77_134_26

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comp(29925..32045)
DNA (2121bp) protein (707aa)
hypothetical protein
hypothetical protein
Peptidase S46 n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IMB6_9BACT (db=UNIREF evalue=0.0 bit_score=697.0 identity=50.22 coverage=90.5233380480905)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
ACD77_134_27

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32118..33221
DNA (1104bp) protein (368aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=153 to=175)
transmembrane_regions (db=TMHMM db_id=tmhmm from=212 to=234)
transmembrane_regions (db=TMHMM db_id=tmhmm from=254 to=276)
EC: 2.7.7.2: Catalyzes the adenylation of flavin mononucleotide (FMN) to form flavin adenine dinucleotide (FAD) coenzyme. Jill Banfield (11/16/12)
Displaying 27 items

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