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ACD78_130

Alias: ACD78_260860.5131.6

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Displaying 9 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD78_130_1
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(2..355)
DNA (354bp) protein (118aa)
ABC transporter ATPase
ATP-BINDING TRANSPORT PROTEIN-RELATED (db=HMMPanther db_id=PTHR19211 from=16 to=96 evalue=1.5e-13)
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=15 to=93 evalue=3.8e-13)
no description (db=Gene3D db_id=G3DSA:3.40.50.300 from=4 to=90 evalue=2.2e-09)
ACD78_130_2
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(362..1174)
DNA (813bp) protein (271aa)
seg (db=Seg db_id=seg from=190 to=220)
transmembrane_regions (db=TMHMM db_id=tmhmm from=243 to=265)
transmembrane_regions 243..265 Tax=ACD78
ACD78_130_3
ACD78, Gracilibacteria, Bacteria

Not on your lists

1353..1688
DNA (336bp) protein (112aa)
seg (db=Seg db_id=seg from=51 to=62)
transmembrane_regions (db=TMHMM db_id=tmhmm from=70 to=92)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=31)
ACD78_130_4
ACD78, Gracilibacteria, Bacteria

Not on your lists

1895..2701
DNA (807bp) protein (269aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=244 to=266)
seg (db=Seg db_id=seg from=41 to=53)
seg (db=Seg db_id=seg from=69 to=84)
seg (db=Seg db_id=seg from=245 to=262)
ACD78_130_5
ACD78, Gracilibacteria, Bacteria

Not on your lists

2708..3298
DNA (591bp) protein (197aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
HAD-like (db=superfamily db_id=SSF56784 from=1 to=191 evalue=2.3e-31)
no description (db=Gene3D db_id=G3DSA:3.40.50.1000 from=80 to=183 evalue=1.2e-16)
HALOACID DEHALOGENASE-LIKE HYDROLASE DOMAIN CONTAINING 3 (db=HMMPanther db_id=PTHR12725:SF5 from=84 to=179 evalue=1.9e-15)
ACD78_130_6
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(3310..3561)
DNA (252bp) protein (84aa)
3310..3561 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD78
ACD78_130_7
ACD78, Gracilibacteria, Bacteria

Not on your lists

comp(3565..3768)
DNA (204bp) protein (68aa)
3565..3768 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD78
ACD78_130_8
ACD78, Gracilibacteria, Bacteria

Not on your lists

3900..4586
DNA (687bp) protein (229aa)
Ribosomal RNA small subunit methyltransferase I
seg (db=Seg db_id=seg from=155 to=169)
Tetrapyrrole methylase (db=superfamily db_id=SSF53790 from=1 to=228 evalue=5.1e-68 interpro_id=IPR000878 interpro_description=Tetrapyrrole methylase GO=Biological Process: metabolic process (GO:0008152), Molecular Function: methyltransferase activity (GO:0008168))
S-ADENOSYLMETHIONINE-DEPENDENT METHYTRANSFERASE (db=HMMPanther db_id=PTHR21091:SF18 from=42 to=227 evalue=5.9e-40)
ACD78_130_9
ACD78, Gracilibacteria, Bacteria

Not on your lists


4654..5163
DNA (510bp) protein (170aa)
pnp; Polyribonucleotide nucleotidyltransferase, RNA binding domain
Ribosomal protein S5 domain 2-like (db=superfamily db_id=SSF54211 from=8 to=157 evalue=3.0e-39 interpro_id=IPR020568 interpro_description=Ribosomal protein S5 domain 2-type fold)
RNase_PH (db=HMMPfam db_id=PF01138 from=25 to=156 evalue=4.1e-13 interpro_id=IPR001247 interpro_description=Exoribonuclease, phosphorolytic domain 1 GO=Molecular Function: 3'-5'-exoribonuclease activity (GO:0000175), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA processing (GO:0006396))
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] alias=ACD78_260860.5131.6G0009,ACD78_260860.5131.6_9,ACD78_C00130G00009 id=124302 tax=ACD78 species=Acidithiobacillus ferrooxidans genus=Acidithiobacillus taxon_order=Acidithiobacillales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=BD1-5 organism_desc=BD1-5
Displaying 9 items

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