ggKbase home page

ACD79_1

Alias: ACD79_2974.6148.10

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_1_1

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)
3..119 - (rbs_motif=GGA/GAG/AGG rbs_spacer=5-10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD27796.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_1_2

Not on your lists

comp(163..2025)
DNA (1863bp) protein (621aa)
ornithine decarboxylase inhibitor-putative sigma54 transciptional regulator n=1 Tax=Gemmata obscuriglobus UQM 2246 RepID=UPI00016C585F (db=UNIREF evalue=9.0e-90 bit_score=335.0 identity=38.14 coverage=68.7600644122383)
sigma-54 factor interaction domain-containing protein
SIGMA54_INTERACT_3 (db=PatternScan db_id=PS00688 from=520 to=529 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
SIGMA54_INTERACT_2 (db=PatternScan db_id=PS00676 from=393 to=408 evalue=0.0 interpro_id=IPR002078 interpro_description=RNA polymerase sigma factor 54, interaction GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: intracellular (GO:0005622), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: transcription factor binding (GO:0008134))
ACD79_1_3

Not on your lists

2122..4353
DNA (2232bp) protein (744aa)
Non-specific serine/threonine protein kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NFL0_9LACT (db=UNIREF evalue=6.0e-55 bit_score=219.0 identity=42.06 coverage=33.4677419354839)
prkC; Serine/threonine-protein kinase PrkC (EC:2.7.11.1)
transmembrane_regions (db=TMHMM db_id=tmhmm from=288 to=310)
seg (db=Seg db_id=seg from=290 to=308)
ACD79_1_4

Not on your lists

4350..5735
DNA (1386bp) protein (462aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
Uncharacterized protein {ECO:0000313|EMBL:EKD27799.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_1_5

Not on your lists

comp(5840..6184)
DNA (345bp) protein (115aa)
5840..6184 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD27800.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 5 items

View Taxonomy