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ACD79_27

Alias: ACD79_42890.12311.17

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_27_1

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1..561
DNA (561bp) protein (187aa)
methyl-accepting chemotaxis sensory transducer
MCPsignal (db=HMMPfam db_id=PF00015 from=2 to=186 evalue=3.9e-39 interpro_id=IPR004089 interpro_description=Chemotaxis methyl-accepting receptor, signalling GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: signal transduction (GO:0007165), Cellular Component: membrane (GO:0016020))
CHEMTRNSDUCR (db=FPrintScan db_id=PR00260 from=15 to=42 evalue=5.5e-19 interpro_id=IPR004090 interpro_description=Chemotaxis methyl-accepting receptor GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165), Cellular Component: membrane (GO:0016020))
CHEMTRNSDUCR (db=FPrintScan db_id=PR00260 from=44 to=73 evalue=5.5e-19 interpro_id=IPR004090 interpro_description=Chemotaxis methyl-accepting receptor GO=Molecular Function: signal transducer activity (GO:0004871), Biological Process: chemotaxis (GO:0006935), Biological Process: signal transduction (GO:0007165), Cellular Component: membrane (GO:0016020))
ACD79_27_2

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comp(794..1633)
DNA (840bp) protein (280aa)
hypothetical protein
Putative uncharacterized protein (Fragment) n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DUI1_9BACT (db=UNIREF evalue=1.0e-53 bit_score=213.0 identity=38.75 coverage=95.0)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=6 to=257 evalue=1.1e-41)
Methyltrans_SAM (db=HMMPfam db_id=PF10672 from=56 to=219 evalue=1.0e-13 interpro_id=IPR019614 interpro_description=S-adenosylmethionine-dependent methyltransferase)
ACD79_27_3

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comp(1650..3329)
DNA (1680bp) protein (560aa)
integral membrane sensor signal transduction histidine kinase
Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08Q07_STIAU (db=UNIREF evalue=6.0e-34 bit_score=149.0 identity=33.07 coverage=42.8571428571429)
seg (db=Seg db_id=seg from=2 to=9)
coiled-coil (db=Coil db_id=coil from=293 to=314 evalue=NA)
ACD79_27_4

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comp(3336..4187)
DNA (852bp) protein (284aa)
HD domain-containing protein
Metal-dependent phosphohydrolase, HD subdomain n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MGJ1_9BACT (db=UNIREF evalue=3.0e-46 bit_score=188.0 identity=34.48 coverage=90.8450704225352)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=1 to=279 evalue=5.3e-70)
no description (db=Gene3D db_id=G3DSA:1.10.3150.10 from=6 to=282 evalue=1.0e-65)
ACD79_27_5

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comp(4200..4529)
DNA (330bp) protein (110aa)
seg (db=Seg db_id=seg from=92 to=103)
Uncharacterized protein {ECO:0000313|EMBL:EKD26984.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_27_6

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comp(4526..4720)
DNA (195bp) protein (65aa)
4526..4720 - (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD26985.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_27_7
Shewanella decolorationis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4761..5606)
DNA (846bp) protein (282aa)
ABC transporter-like protein
ABC transporter related n=3 Tax=Shewanella RepID=A1RKL2_SHESW (db=UNIREF evalue=1.0e-43 bit_score=180.0 identity=45.33 coverage=75.177304964539)
seg (db=Seg db_id=seg from=109 to=118)
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=5 to=223 evalue=1.4e-78)
ACD79_27_8

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comp(5744..6577)
DNA (834bp) protein (278aa)
seg (db=Seg db_id=seg from=251 to=268)
seg (db=Seg db_id=seg from=211 to=227)
seg (db=Seg db_id=seg from=176 to=191)
seg (db=Seg db_id=seg from=145 to=166)
ACD79_27_9

Not on your lists

comp(6950..7231)
DNA (282bp) protein (94aa)
plasmid maintenance system killer protein
Plasmid_killer (db=HMMPfam db_id=PF05015 from=1 to=93 evalue=3.2e-23 interpro_id=IPR007711 interpro_description=Plasmid maintenance system killer)
RelE-like (db=superfamily db_id=SSF143011 from=1 to=93 evalue=5.8e-20)
Uncharacterized protein {ECO:0000313|EMBL:EKD26978.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_27_10

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comp(7923..9005)
DNA (1083bp) protein (361aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=289 to=310 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKD26972.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein alias=ACD79_C00028G00010,ACD79_42890.12311.17G0010,ACD79_42890.12311.17_10 id=125157 tax=ACD79 species=Histophilus somni genus=Histophilus taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
ACD79_27_11

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comp(9185..9445)
DNA (261bp) protein (87aa)
seg (db=Seg db_id=seg from=64 to=78)
Uncharacterized protein {ECO:0000313|EMBL:EKD26973.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_27_12

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9568..10458
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa RepID=Q1W554_PSEAE (db=UNIREF evalue=2.0e-09 bit_score=67.0 identity=38.82 coverage=27.6094276094276)
hypothetical protein
seg (db=Seg db_id=seg from=236 to=252)
seg (db=Seg db_id=seg from=204 to=224)
ACD79_27_13

Not on your lists

comp(10481..11179)
DNA (699bp) protein (233aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=43 to=64 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=20 to=37)
ACD79_27_14

Not on your lists

comp(11504..11734)
DNA (231bp) protein (77aa)
Genome sequencing data, contig C278 n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YBV5_MICAE (db=UNIREF evalue=8.0e-20 bit_score=99.4 identity=53.42 coverage=93.5064935064935)
Uncharacterized protein {ECO:0000313|EMBL:EKD26976.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
ACD79_27_15

Not on your lists

comp(11712..11978)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JJ34_9ARCH (db=UNIREF evalue=1.0e-26 bit_score=122.0 identity=62.07 coverage=96.6292134831461)
hypothetical protein
UPF0150 (db=HMMPfam db_id=PF03681 from=21 to=58 evalue=4.0e-06 interpro_id=IPR005357 interpro_description=Uncharacterised protein family UPF0150)
Uncharacterized protein {ECO:0000313|EMBL:EKD26977.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 15 items

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