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ACD79_60

Alias: ACD79_43784.21650.22

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD79_60_1

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3..188
DNA (186bp) protein (62aa)
3..188 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD26895.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_60_2

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comp(226..2601)
DNA (2376bp) protein (792aa)
Putative uncharacterized protein n=1 Tax=Parachlamydia acanthamoebae str. Hall's coccus RepID=D1R9Q5_9CHLA (db=UNIREF evalue=2.0e-52 bit_score=211.0 identity=27.65 coverage=69.9494949494949)
phosphoglucomutase/phosphomannomutase family protein
seg (db=Seg db_id=seg from=763 to=777)
seg (db=Seg db_id=seg from=265 to=276)
ACD79_60_3

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2712..3110
DNA (399bp) protein (133aa)
seg (db=Seg db_id=seg from=13 to=30)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKD26897.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_60_4

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3284..3613
DNA (330bp) protein (110aa)
ribosome-associated protein, Iojap-like protein
Iojap-like protein n=1 Tax=bacterium S5 RepID=D3BYI1_9BACT (db=UNIREF evalue=3.0e-16 bit_score=87.0 identity=34.58 coverage=96.3636363636364)
iojap_ybeB: iojap-like ribosome-associated (db=HMMTigr db_id=TIGR00090 from=3 to=102 evalue=2.5e-29 interpro_id=IPR004394 interpro_description=Iojap-related protein)
DUF143 (db=HMMPfam db_id=PF02410 from=5 to=102 evalue=1.9e-27 interpro_id=IPR004394 interpro_description=Iojap-related protein)
ACD79_60_5

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3618..5294
DNA (1677bp) protein (559aa)
Arginyl-tRNA synthetase n=1 Tax=Geobacter sp. M18 RepID=C6MT47_9DELT (db=UNIREF evalue=2.0e-135 bit_score=486.0 identity=45.25 coverage=92.8443649373882)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
argS: arginyl-tRNA synthetase (db=HMMTigr db_id=TIGR00456 from=4 to=558 evalue=1.3e-129 interpro_id=IPR001278 interpro_description=Arginyl-tRNA synthetase, class Ic GO=Molecular Function: arginine-tRNA ligase activity (GO:0004814), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: arginyl-tRNA aminoacylation (GO:0006420))
ACD79_60_6

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5309..6286
DNA (978bp) protein (326aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=2 to=21)
NHL repeat (db=superfamily db_id=SSF101898 from=44 to=313 evalue=3.6e-11)
Uncharacterized protein {ECO:0000313|EMBL:EKD26900.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_60_7

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comp(6444..6785)
DNA (342bp) protein (114aa)
4Fe-4S ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding n=3 Tax=Clostridium thermocellum RepID=A3DJT6_CLOTH (db=UNIREF evalue=4.0e-29 bit_score=129.0 identity=52.25 coverage=95.6140350877193)
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=46 to=57 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
4FE4S_FER_1 (db=PatternScan db_id=PS00198 from=77 to=88 evalue=0.0 interpro_id=IPR017900 interpro_description=4Fe-4S ferredoxin, iron-sulphur binding, conserved site GO=Molecular Function: electron carrier activity (GO:0009055), Molecular Function: iron-sulfur cluster binding (GO:0051536))
ACD79_60_8

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comp(6809..7891)
DNA (1083bp) protein (361aa)
Ni,Fe-hydrogenase III large subunit
Ni,Fe-hydrogenase III large subunit
Ech hydrogenase subunit E n=3 Tax=Clostridium thermocellum RepID=A3DJT7_CLOTH (db=UNIREF evalue=2.0e-151 bit_score=538.0 identity=70.31 coverage=98.6149584487535)
NI_HGENASE_L_1 (db=PatternScan db_id=PS00507 from=44 to=69 evalue=0.0 interpro_id=IPR018194 interpro_description=Nickel-dependent hydrogenase, large subunit, nickel binding site GO=Molecular Function: ferredoxin hydrogenase activity (GO:0008901), Molecular Function: nickel ion binding (GO:0016151), Biological Process: oxidation reduction (GO:0055114))
ACD79_60_9

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comp(7895..8263)
DNA (369bp) protein (123aa)
NADH dehydrogenase (ubiquinone), 30 kDa subunit
Complex1_30kDa (db=HMMPfam db_id=PF00329 from=19 to=95 evalue=1.6e-13 interpro_id=IPR001268 interpro_description=NADH:ubiquinone oxidoreductase, 30kDa subunit GO=Molecular Function: NADH dehydrogenase (ubiquinone) activity (GO:0008137), Biological Process: oxidation reduction (GO:0055114))
Nqo5-like (db=superfamily db_id=SSF143243 from=5 to=95 evalue=2.8e-12)
NADH-UBIQUINONE OXIDOREDUCTASE-RELATED (db=HMMPanther db_id=PTHR10884 from=42 to=95 evalue=0.00082)
ACD79_60_10

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comp(8268..9173)
DNA (906bp) protein (302aa)
NADH ubiquinone oxidoreductase 20 kDa subunit n=1 Tax=Opitutus terrae PB90-1 RepID=B2A054_OPITP (db=UNIREF evalue=3.0e-89 bit_score=331.0 identity=53.25 coverage=98.3443708609272)
NADH ubiquinone oxidoreductase 20 kDa subunit
NADH ubiquinone oxidoreductase 20 kDa subunit
seg (db=Seg db_id=seg from=271 to=283)
ACD79_60_11

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comp(9183..10037)
DNA (855bp) protein (285aa)
formate hydrogenlyase subunit 4
seg (db=Seg db_id=seg from=85 to=102)
transmembrane_regions (db=TMHMM db_id=tmhmm from=63 to=82)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
ACD79_60_12

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comp(10061..11944)
DNA (1884bp) protein (628aa)
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit
NADH dehydrogenase (Quinone) n=1 Tax=Methanosphaerula palustris E1-9c RepID=B8GFV4_METPE (db=UNIREF evalue=2.0e-148 bit_score=530.0 identity=51.58 coverage=94.2675159235669)
transmembrane_regions (db=TMHMM db_id=tmhmm from=373 to=395)
ACD79_60_13

Not on your lists

12164..13921
DNA (1758bp) protein (586aa)
hemagglutinin
seg (db=Seg db_id=seg from=39 to=88)
seg (db=Seg db_id=seg from=248 to=337)
seg (db=Seg db_id=seg from=342 to=370)
ACD79_60_14

Not on your lists

13923..15524
DNA (1602bp) protein (534aa)
Uncharacterized conserved protein n=1 Tax=Pelotomaculum thermopropionicum SI RepID=A5D025_PELTS (db=UNIREF evalue=5.0e-176 bit_score=621.0 identity=55.85 coverage=98.876404494382)
hypothetical protein
hypothetical protein
Glycoside hydrolase/deacetylase (db=superfamily db_id=SSF88713 from=4 to=408 evalue=4.8e-114 interpro_id=IPR011330 interpro_description=Glycoside hydrolase/deacetylase, beta/alpha-barrel GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: carbohydrate metabolic process (GO:0005975))
ACD79_60_15

Not on your lists

15521..16915
DNA (1395bp) protein (465aa)
UDP-N-acetylmuramate--alanine ligase (EC:6.3.2.8)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE (db=HMMPanther db_id=PTHR23135:SF5 from=120 to=464 evalue=5.8e-37)
MUR LIGASE FAMILY MEMBER (db=HMMPanther db_id=PTHR23135 from=120 to=464 evalue=5.8e-37)
ACD79_60_16

Not on your lists

17355..18140
DNA (786bp) protein (262aa)
Putative glycosyl transferase (WbnE) n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQW9_9PLAN (db=UNIREF evalue=4.0e-57 bit_score=224.0 identity=42.02 coverage=97.7099236641221)
glycosyltransferase
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=1 to=261 evalue=5.6e-52)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF41 from=1 to=261 evalue=5.6e-52)
ACD79_60_17

Not on your lists

18137..19246
DNA (1110bp) protein (370aa)
tarO; putative glycosyl transferase
Glycosyl transferase, family 4, conserved region n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N6G9_9BACT (db=UNIREF evalue=3.0e-32 bit_score=143.0 identity=37.67 coverage=77.5675675675676)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=114)
ACD79_60_18

Not on your lists

comp(19235..19351)
DNA (117bp) protein (39aa)
19235..19351 - (rbs_motif=AGGA/GGAG/GAGG rbs_spacer=11-12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD26893.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_60_19

Not on your lists

comp(20372..20500)
DNA (129bp) protein (43aa)
20372..20500 - (rbs_motif=3Base/5BMM rbs_spacer=13-15bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD26894.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD79_60_20

Not on your lists

21477..21689
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MQ27_9FIRM (db=UNIREF evalue=5.0e-13 bit_score=76.6 identity=59.42 coverage=94.3661971830986)
RecN; DNA repair ATPase
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=71 evalue=4.8e-19)
DUF258 (db=HMMPfam db_id=PF03193 from=7 to=66 evalue=1.7e-05 interpro_id=IPR004881 interpro_description=GTPase EngC GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
Displaying 20 items

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